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UniProtKB - O34933 (YFMD_BACSU)
Protein
Fe(3+)-citrate import system permease protein YfmD
Gene
yfmD
Organism
Bacillus subtilis (strain 168)
Status
Functioni
Part of the ABC transporter complex YfmCDEF involved in citrate-dependent Fe3+ import. Involved in the translocation of the substrate across the membrane (Probable).
1 PublicationGO - Molecular functioni
- transmembrane transporter activity Source: GO_Central
GO - Biological processi
- siderophore-dependent iron import into cell Source: GO_Central
Keywordsi
Biological process | Ion transport, Iron transport, Transport |
Ligand | Iron |
Enzyme and pathway databases
BioCyci | BSUB:BSU07510-MONOMER |
Names & Taxonomyi
Protein namesi | Recommended name: Fe(3+)-citrate import system permease protein YfmDAlternative name(s): Ferric-citrate import system permease protein |
Gene namesi | Name:yfmD Ordered Locus Names:BSU07510 |
Organismi | Bacillus subtilis (strain 168) |
Taxonomic identifieri | 224308 [NCBI] |
Taxonomic lineagei | Bacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › |
Proteomesi |
|
Subcellular locationi
Plasma membrane
- Cell membrane Curated; Multi-pass membrane protein Curated
Plasma Membrane
- integral component of plasma membrane Source: GO_Central
Topology
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Transmembranei | 13 – 33 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 67 – 87 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 97 – 117 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 121 – 141 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 151 – 171 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 201 – 221 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 238 – 258 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 279 – 299 | HelicalSequence analysisAdd BLAST | 21 | |
Transmembranei | 302 – 322 | HelicalSequence analysisAdd BLAST | 21 |
Keywords - Cellular componenti
Cell membrane, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000361676 | 1 – 333 | Fe(3+)-citrate import system permease protein YfmDAdd BLAST | 333 |
Proteomic databases
PaxDbi | O34933 |
Interactioni
Subunit structurei
The complex is composed of one ATP-binding protein (YfmF), two transmembrane proteins (YfmD and YfmE) and a solute-binding protein (YfmC).
CuratedProtein-protein interaction databases
STRINGi | 224308.BSU07510 |
Family & Domainsi
Sequence similaritiesi
Keywords - Domaini
Transmembrane, Transmembrane helixPhylogenomic databases
eggNOGi | COG0609, Bacteria |
InParanoidi | O34933 |
OMAi | QRLFMPY |
PhylomeDBi | O34933 |
Family and domain databases
Gene3Di | 1.10.3470.10, 1 hit |
InterProi | View protein in InterPro IPR037294, ABC_BtuC-like IPR000522, ABC_transptr_permease_BtuC |
PANTHERi | PTHR30472, PTHR30472, 1 hit |
Pfami | View protein in Pfam PF01032, FecCD, 1 hit |
SUPFAMi | SSF81345, SSF81345, 1 hit |
i Sequence
Sequence statusi: Complete.
O34933-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MYHSAKRRSS SRLMMFIIAL IIFIFGLGLN LSVGASDISI IDSLKYLFVW
60 70 80 90 100
DGSKEQLIIS TLRLPRTLIG VFVGASLAVA GALMQAMTRN PLASPQIFGV
110 120 130 140 150
NAGASLFVVA SLVILPASPY SSVIFAFAGA AAGGAIVYMI ASSGGMTPVK
160 170 180 190 200
LALSGMAVHL FLSSMTQAII ILNESGEDVL YWMTGAIDGS NWQDVITIAP
210 220 230 240 250
FSVIGIGLAL VFSGSVSVLG LGDETAKGLG QNMNGIRILI SLIILILSGA
260 270 280 290 300
SVAVAGPIGF VGLLVPHIVR KLIGEHYQYV LPFSALFGAI LLVYADVLAR
310 320 330
WIAFPYESPV GIVTAIIGTP FFLYLARKGR NLK
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D86417 Genomic DNA Translation: BAA22318.1 AL009126 Genomic DNA Translation: CAB12580.1 |
PIRi | C69812 |
RefSeqi | NP_388632.1, NC_000964.3 WP_003243835.1, NZ_JNCM01000032.1 |
Genome annotation databases
EnsemblBacteriai | CAB12580; CAB12580; BSU_07510 |
GeneIDi | 936110 |
KEGGi | bsu:BSU07510 |
PATRICi | fig|224308.179.peg.817 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | D86417 Genomic DNA Translation: BAA22318.1 AL009126 Genomic DNA Translation: CAB12580.1 |
PIRi | C69812 |
RefSeqi | NP_388632.1, NC_000964.3 WP_003243835.1, NZ_JNCM01000032.1 |
3D structure databases
AlphaFoldDBi | O34933 |
SMRi | O34933 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 224308.BSU07510 |
Proteomic databases
PaxDbi | O34933 |
Genome annotation databases
EnsemblBacteriai | CAB12580; CAB12580; BSU_07510 |
GeneIDi | 936110 |
KEGGi | bsu:BSU07510 |
PATRICi | fig|224308.179.peg.817 |
Phylogenomic databases
eggNOGi | COG0609, Bacteria |
InParanoidi | O34933 |
OMAi | QRLFMPY |
PhylomeDBi | O34933 |
Enzyme and pathway databases
BioCyci | BSUB:BSU07510-MONOMER |
Family and domain databases
Gene3Di | 1.10.3470.10, 1 hit |
InterProi | View protein in InterPro IPR037294, ABC_BtuC-like IPR000522, ABC_transptr_permease_BtuC |
PANTHERi | PTHR30472, PTHR30472, 1 hit |
Pfami | View protein in Pfam PF01032, FecCD, 1 hit |
SUPFAMi | SSF81345, SSF81345, 1 hit |
MobiDBi | Search... |
Entry informationi
Entry namei | YFMD_BACSU | |
Accessioni | O34933Primary (citable) accession number: O34933 Secondary accession number(s): Q79ET2 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | February 10, 2009 |
Last sequence update: | January 1, 1998 | |
Last modified: | May 25, 2022 | |
This is version 119 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Prokaryotic Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families