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Protein

30S ribosomal protein S12

Gene

rps12

Organism
Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S12UniRule annotation
Gene namesi
Name:rps12UniRule annotation
Ordered Locus Names:AF_1892
OrganismiArchaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
Taxonomic identifieri224325 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaArchaeoglobiArchaeoglobalesArchaeoglobaceaeArchaeoglobus
Proteomesi
  • UP000002199 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001463641 – 14230S ribosomal protein S12Add BLAST142

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi224325.AF1892

Structurei

3D structure databases

ProteinModelPortaliO28387
SMRiO28387
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS12 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04255 Archaea
COG0048 LUCA
KOiK02950
OMAiKFRWSQR
OrthoDBiPOG093Z01ES

Family and domain databases

CDDicd03367 Ribosomal_S23, 1 hit
HAMAPiMF_00403_A Ribosomal_S12_A, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006032 Ribosomal_S12/S23
IPR022863 Ribosomal_S12_arc
IPR005680 Ribosomal_S23_euk/arc
PANTHERiPTHR11652 PTHR11652, 1 hit
PfamiView protein in Pfam
PF00164 Ribosom_S12_S23, 1 hit
PIRSFiPIRSF002133 Ribosomal_S12/S23, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00982 uS12_E_A, 1 hit
PROSITEiView protein in PROSITE
PS00055 RIBOSOMAL_S12, 1 hit

Sequencei

Sequence statusi: Complete.

O28387-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGRGLFAARK LMENRKKFRW SDRRFVRRTL GLAAKADPLE GAPMARGIVL
60 70 80 90 100
EKIGIEARQP NSAIRKAVRV QLIKNGRQIT AFCPGDGAIN FIDEHDEVIV
110 120 130 140
EKIGGRMGRS MGDIPGVRYK VVKVNNTSLR ELVRGRKEKR LR
Length:142
Mass (Da):16,052
Last modified:March 1, 2005 - v2
Checksum:iA566F6F5B145F6AB
GO

Sequence cautioni

The sequence AAB89362 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA Translation: AAB89362.1 Different initiation.
PIRiC69486
RefSeqiWP_048064744.1, NC_000917.1

Genome annotation databases

EnsemblBacteriaiAAB89362; AAB89362; AF_1892
GeneIDi24795636
KEGGiafu:AF_1892

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE000782 Genomic DNA Translation: AAB89362.1 Different initiation.
PIRiC69486
RefSeqiWP_048064744.1, NC_000917.1

3D structure databases

ProteinModelPortaliO28387
SMRiO28387
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi224325.AF1892

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAB89362; AAB89362; AF_1892
GeneIDi24795636
KEGGiafu:AF_1892

Phylogenomic databases

eggNOGiarCOG04255 Archaea
COG0048 LUCA
KOiK02950
OMAiKFRWSQR
OrthoDBiPOG093Z01ES

Family and domain databases

CDDicd03367 Ribosomal_S23, 1 hit
HAMAPiMF_00403_A Ribosomal_S12_A, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR006032 Ribosomal_S12/S23
IPR022863 Ribosomal_S12_arc
IPR005680 Ribosomal_S23_euk/arc
PANTHERiPTHR11652 PTHR11652, 1 hit
PfamiView protein in Pfam
PF00164 Ribosom_S12_S23, 1 hit
PIRSFiPIRSF002133 Ribosomal_S12/S23, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00982 uS12_E_A, 1 hit
PROSITEiView protein in PROSITE
PS00055 RIBOSOMAL_S12, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiRS12_ARCFU
AccessioniPrimary (citable) accession number: O28387
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: March 1, 2005
Last modified: October 10, 2018
This is version 99 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families
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Main funding by: National Institutes of Health

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