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Protein

Endochitinase At2g43600

Gene

At2g43600

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Random endo-hydrolysis of N-acetyl-beta-D-glucosaminide (1->4)-beta-linkages in chitin and chitodextrins.By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Chitin degradation, Plant defense, Polysaccharide degradation
LigandChitin-binding

Protein family/group databases

CAZyiCBM18 Carbohydrate-Binding Module Family 18
GH19 Glycoside Hydrolase Family 19

Names & Taxonomyi

Protein namesi
Recommended name:
Endochitinase At2g43600Curated (EC:3.2.1.14)
Gene namesi
Ordered Locus Names:At2g43600Imported
ORF Names:F18O19.29Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G43600
TAIRilocus:2043954 AT2G43600

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_000043391423 – 273Endochitinase At2g43600Sequence analysisAdd BLAST251

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Disulfide bondi25 ↔ 37PROSITE-ProRule annotation
Disulfide bondi30 ↔ 43PROSITE-ProRule annotation
Disulfide bondi36 ↔ 50PROSITE-ProRule annotation
Disulfide bondi54 ↔ 59PROSITE-ProRule annotation
Glycosylationi99N-linked (GlcNAc...) asparaginePROSITE-ProRule annotation1

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiO24654

Expressioni

Gene expression databases

ExpressionAtlasiO24654 baseline and differential
GenevisibleiO24654 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G43600.1

Structurei

3D structure databases

ProteinModelPortaliO24654
SMRiO24654
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 61Chitin-binding type-1PROSITE-ProRule annotationAdd BLAST39

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni78 – 273CatalyticBy similarityAdd BLAST196

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiKOG4742 Eukaryota
COG3979 LUCA
HOGENOMiHOG000231411
InParanoidiO24654
KOiK01183
OMAiYGFNYNV
OrthoDBiEOG09360LUQ
PhylomeDBiO24654

Family and domain databases

CDDicd00325 chitinase_glyco_hydro_19, 1 hit
Gene3Di3.30.60.10, 1 hit
InterProiView protein in InterPro
IPR001002 Chitin-bd_1
IPR018371 Chitin-binding_1_CS
IPR036861 Endochitinase-like_sf
IPR016283 Glyco_hydro_19
IPR000726 Glyco_hydro_19_cat
IPR023346 Lysozyme-like_dom_sf
PfamiView protein in Pfam
PF00182 Glyco_hydro_19, 2 hits
PIRSFiPIRSF001060 Endochitinase, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD000609 Chitin_bd_1, 1 hit
SMARTiView protein in SMART
SM00270 ChtBD1, 1 hit
SUPFAMiSSF53955 SSF53955, 1 hit
SSF57016 SSF57016, 1 hit
PROSITEiView protein in PROSITE
PS00026 CHIT_BIND_I_1, 1 hit
PS50941 CHIT_BIND_I_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O24654-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIKNVIFSL FILAILAETV FSQNCMDTSC PGLKECCSRW GFCGTKDEYC
60 70 80 90 100
GFFCFSGPCN IKGKSYGYDY NVDAGPRGKI ETVITSALFD SIMSKVESNC
110 120 130 140 150
SAKGFYTYEA FITAFKSFGA YKGKVAKREI AAILAHFSYG SKSFCYKEEI
160 170 180 190 200
SNERYCSKSK KYPCEPGKNY YGRGLLQSIT WNEYYGAGKH LGLPLLKDPD
210 220 230 240 250
LVSRSPEVAF KFAMWFWNRN VRPALYLGFG EITKRVDGRE CGNWRRDDTK
260 270
NKVKQYIEFC EMLGVTPDQG LDC
Length:273
Mass (Da):30,920
Last modified:January 1, 1998 - v1
Checksum:iC8096D4C6B13FD2F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002333 Genomic DNA Translation: AAB64046.1
AC002335 Genomic DNA Translation: AAM14809.1
CP002685 Genomic DNA Translation: AEC10294.1
PIRiB84868
RefSeqiNP_001318415.1, NM_001337048.1

Genome annotation databases

EnsemblPlantsiAT2G43600.1; AT2G43600.1; AT2G43600
AT2G43600.2; AT2G43600.2; AT2G43600
GeneIDi818962
GrameneiAT2G43600.1; AT2G43600.1; AT2G43600
AT2G43600.2; AT2G43600.2; AT2G43600
KEGGiath:AT2G43600

Similar proteinsi

Entry informationi

Entry nameiCHI60_ARATH
AccessioniPrimary (citable) accession number: O24654
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 14, 2015
Last sequence update: January 1, 1998
Last modified: April 25, 2018
This is version 135 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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