UniProtKB - O23561 (RAB1A_ARATH)
Protein
Ras-related protein RABB1a
Gene
RABB1A
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Functioni
Intracellular vesicle trafficking and protein transport.By similarity
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Nucleotide bindingi | 13 – 20 | GTPBy similarity | 8 | |
Nucleotide bindingi | 61 – 65 | GTPBy similarity | 5 | |
Nucleotide bindingi | 119 – 122 | GTPBy similarity | 4 | |
Nucleotide bindingi | 149 – 150 | GTPBy similarity | 2 |
GO - Molecular functioni
- GTPase activity Source: InterPro
- GTP binding Source: UniProtKB-KW
GO - Biological processi
- protein transport Source: UniProtKB-KW
Keywordsi
Biological process | Protein transport, Transport |
Ligand | GTP-binding, Nucleotide-binding |
Names & Taxonomyi
Protein namesi | Recommended name: Ras-related protein RABB1aShort name: AtRABB1a Alternative name(s): Ras-related protein Rab2B Short name: AtRab2B |
Gene namesi | Name:RABB1A Synonyms:RAB2B Ordered Locus Names:At4g17160 ORF Names:dl4615c, FCAALL.364 |
Organismi | Arabidopsis thaliana (Mouse-ear cress) |
Taxonomic identifieri | 3702 [NCBI] |
Taxonomic lineagei | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliopsida › eudicotyledons › Gunneridae › Pentapetalae › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Proteomesi |
|
Organism-specific databases
Araporti | AT4G17160 |
TAIRi | locus:2130614, AT4G17160 |
Subcellular locationi
Plasma membrane
- Cell membrane Curated; Lipid-anchor Curated; Cytoplasmic side Curated
Golgi apparatus
- Golgi apparatus Source: GO_Central
Plasma Membrane
- plasma membrane Source: UniProtKB-SubCell
Keywords - Cellular componenti
Cell membrane, MembranePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000407354 | 1 – 205 | Ras-related protein RABB1aAdd BLAST | 205 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Lipidationi | 203 | S-geranylgeranyl cysteineBy similarity | 1 | |
Lipidationi | 204 | S-geranylgeranyl cysteineBy similarity | 1 |
Keywords - PTMi
Lipoprotein, PrenylationProteomic databases
PaxDbi | O23561 |
PRIDEi | O23561 |
ProteomicsDBi | 236496 |
PTM databases
iPTMneti | O23561 |
Expressioni
Gene expression databases
ExpressionAtlasi | O23561, baseline and differential |
Genevisiblei | O23561, AT |
Family & Domainsi
Motif
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Motifi | 35 – 43 | Effector regionBy similarity | 9 |
Sequence similaritiesi
Phylogenomic databases
eggNOGi | KOG0098, Eukaryota |
HOGENOMi | CLU_041217_23_1_1 |
InParanoidi | O23561 |
OMAi | HASENMT |
OrthoDBi | 1271975at2759 |
PhylomeDBi | O23561 |
Family and domain databases
InterProi | View protein in InterPro IPR027417, P-loop_NTPase IPR005225, Small_GTP-bd_dom IPR001806, Small_GTPase |
Pfami | View protein in Pfam PF00071, Ras, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
TIGRFAMsi | TIGR00231, small_GTP, 1 hit |
PROSITEi | View protein in PROSITE PS51419, RAB, 1 hit |
i Sequence
Sequence statusi: Complete.
O23561-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSYAYRFKYI IIGDTGVGKS CLLLKFTDKR FQAVHDLTIG VEFGAKTITI
60 70 80 90 100
DNKPIKLQIW DTAGQESFRS VTRSYYRGRA GTLLVYDITR RETFNHLASW
110 120 130 140 150
LEEARQHASE NMTTMLIGNK CDLEDKRTVS TEEGEQFARE HGLIFMEASA
160 170 180 190 200
KTAHNVEEAF VETAATIYKR IQDGVVDEAN EPGITPGPFG GKDASSSQQR
RGCCG
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | Z97343 Genomic DNA Translation: CAB10497.1 AL161545 Genomic DNA Translation: CAB80987.1 CP002687 Genomic DNA Translation: AEE83856.1 DQ056652 mRNA Translation: AAY78799.1 |
PIRi | D71440 |
RefSeqi | NP_193449.1, NM_117820.2 |
Genome annotation databases
EnsemblPlantsi | AT4G17160.1; AT4G17160.1; AT4G17160 |
GeneIDi | 827427 |
Gramenei | AT4G17160.1; AT4G17160.1; AT4G17160 |
KEGGi | ath:AT4G17160 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | Z97343 Genomic DNA Translation: CAB10497.1 AL161545 Genomic DNA Translation: CAB80987.1 CP002687 Genomic DNA Translation: AEE83856.1 DQ056652 mRNA Translation: AAY78799.1 |
PIRi | D71440 |
RefSeqi | NP_193449.1, NM_117820.2 |
3D structure databases
SMRi | O23561 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 3702.AT4G17160.1 |
PTM databases
iPTMneti | O23561 |
Proteomic databases
PaxDbi | O23561 |
PRIDEi | O23561 |
ProteomicsDBi | 236496 |
Genome annotation databases
EnsemblPlantsi | AT4G17160.1; AT4G17160.1; AT4G17160 |
GeneIDi | 827427 |
Gramenei | AT4G17160.1; AT4G17160.1; AT4G17160 |
KEGGi | ath:AT4G17160 |
Organism-specific databases
Araporti | AT4G17160 |
TAIRi | locus:2130614, AT4G17160 |
Phylogenomic databases
eggNOGi | KOG0098, Eukaryota |
HOGENOMi | CLU_041217_23_1_1 |
InParanoidi | O23561 |
OMAi | HASENMT |
OrthoDBi | 1271975at2759 |
PhylomeDBi | O23561 |
Miscellaneous databases
PROi | PR:O23561 |
Gene expression databases
ExpressionAtlasi | O23561, baseline and differential |
Genevisiblei | O23561, AT |
Family and domain databases
InterProi | View protein in InterPro IPR027417, P-loop_NTPase IPR005225, Small_GTP-bd_dom IPR001806, Small_GTPase |
Pfami | View protein in Pfam PF00071, Ras, 1 hit |
SUPFAMi | SSF52540, SSF52540, 1 hit |
TIGRFAMsi | TIGR00231, small_GTP, 1 hit |
PROSITEi | View protein in PROSITE PS51419, RAB, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | RAB1A_ARATH | |
Accessioni | O23561Primary (citable) accession number: O23561 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | May 3, 2011 |
Last sequence update: | January 1, 1998 | |
Last modified: | December 2, 2020 | |
This is version 133 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Plant Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Reference proteomeDocuments
- Arabidopsis thaliana
Arabidopsis thaliana: entries and gene names - SIMILARITY comments
Index of protein domains and families