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Protein

60S ribosomal protein L15-1

Gene

RPL15A

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • RNA binding Source: GO_Central
  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L15-1
Gene namesi
Name:RPL15A
Ordered Locus Names:At4g16720
ORF Names:dl4385c, FCAALL.416
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G16720
TAIRilocus:2129081 AT4G16720

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001275561 – 20460S ribosomal protein L15-1Add BLAST204

Proteomic databases

PaxDbiO23515
PRIDEiO23515

PTM databases

iPTMnetiO23515

Expressioni

Gene expression databases

ExpressionAtlasiO23515 baseline and differential
GenevisibleiO23515 AT

Interactioni

Protein-protein interaction databases

BioGridi12668, 2 interactors
STRINGi3702.AT4G16720.1

Structurei

3D structure databases

ProteinModelPortaliO23515
SMRiO23515
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1678 Eukaryota
COG1632 LUCA
HOGENOMiHOG000229584
InParanoidiO23515
KOiK02877
OMAiYWVAQDS
OrthoDBiEOG09360NW9
PhylomeDBiO23515

Family and domain databases

Gene3Di3.40.1120.10, 1 hit
InterProiView protein in InterPro
IPR024794 Rbsml_L15e_core_dom_sf
IPR000439 Ribosomal_L15e
IPR020925 Ribosomal_L15e_CS
IPR012678 Ribosomal_L23/L15e_core_dom_sf
PANTHERiPTHR11847 PTHR11847, 1 hit
PfamiView protein in Pfam
PF00827 Ribosomal_L15e, 1 hit
SMARTiView protein in SMART
SM01384 Ribosomal_L15e, 1 hit
SUPFAMiSSF54189 SSF54189, 1 hit
PROSITEiView protein in PROSITE
PS01194 RIBOSOMAL_L15E, 1 hit

Sequencei

Sequence statusi: Complete.

O23515-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGAYKYVSEL WRKKQSDVMR FLQRVRCWEY RQQPSIVRLV RPTRPDKARR
60 70 80 90 100
LGYKAKQGFV VYRVRVRRGG RKRPVPKGIV YGKPTNQGVT QLKFQRSKRS
110 120 130 140 150
VAEERAGRKL GGLRVVNSYW LNEDSTYKYY EIILVDPAHN AVRNDPRINW
160 170 180 190 200
ICNPVHKHRE LRGLTSEGKK NRGLRGKGHN NHKNRPSRRA TWKKNNSLSL

RRYR
Length:204
Mass (Da):24,239
Last modified:January 1, 1998 - v1
Checksum:iEBD8D4BE0D1B97E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z97341 Genomic DNA Translation: CAB10447.1
AL161544 Genomic DNA Translation: CAB78714.1
CP002687 Genomic DNA Translation: AEE83791.1
AF370352 mRNA Translation: AAK44167.1
AY058841 mRNA Translation: AAL24229.1
AY075603 mRNA Translation: AAL91619.1
AY133797 mRNA Translation: AAM91731.1
AY143818 mRNA Translation: AAN28757.1
AY086316 mRNA Translation: AAM64387.1
PIRiE71434
RefSeqiNP_193405.1, NM_117773.4
UniGeneiAt.21296
At.74971

Genome annotation databases

EnsemblPlantsiAT4G16720.1; AT4G16720.1; AT4G16720
GeneIDi827375
GrameneiAT4G16720.1; AT4G16720.1; AT4G16720
KEGGiath:AT4G16720

Similar proteinsi

Entry informationi

Entry nameiRL151_ARATH
AccessioniPrimary (citable) accession number: O23515
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: January 1, 1998
Last modified: April 25, 2018
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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