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Entry version 150 (22 Apr 2020)
Sequence version 1 (01 Jan 1998)
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Protein

Serine/arginine-rich-splicing factor SR34

Gene

SR34

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score:

Annotation score:5 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

General splicing factor. Can promote splice site selection in vitro presumably by antagonizing the effects of the A1 heterogeneous nuclear ribonucleoprotein. May have an essential function during early plant development.1 Publication

Miscellaneous

The splicing pattern of the pre-mRNA is regulated in a tissue-specific manner and by development, and changes in response to various types of abiotic stresses and hormones (PubMed:10215626, PubMed:17319848).2 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionRNA-binding
Biological processmRNA processing, mRNA splicing

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Serine/arginine-rich-splicing factor SR34
Short name:
At-SR34
Short name:
At-SRp34
Short name:
AtSR34
Alternative name(s):
Pre-mRNA-splicing factor SF2
SR1 protein
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:SR34
Synonyms:SF2, SR1, SRP34
Ordered Locus Names:At1g02840
ORF Names:F22D16.16, F22D16_30
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiArabidopsis thaliana (Mouse-ear cress)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri3702 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006548 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 1

Organism-specific databases

Arabidopsis Information Portal

More...
Araporti
AT1G02840

The Arabidopsis Information Resource

More...
TAIRi
locus:2024770 AT1G02840

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus, Spliceosome

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00000819171 – 303Serine/arginine-rich-splicing factor SR34Add BLAST303

<p>This subsection of the <a href="http://www.uniprot.org/help/ptm%5Fprocessing%5Fsection">PTM/processing</a> section describes post-translational modifications (PTMs). This subsection <strong>complements</strong> the information provided at the sequence level or describes modifications for which <strong>position-specific data is not yet available</strong>.<p><a href='/help/post-translational_modification' target='_top'>More...</a></p>Post-translational modificationi

Extensively phosphorylated on serine residues in the RS domain.3 Publications

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDb, a database of protein abundance averages across all three domains of life

More...
PaxDbi
O22315

PRoteomics IDEntifications database

More...
PRIDEi
O22315

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
O22315

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

<p>This subsection of the 'Expression' section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms. By default, the information is derived from experiments at the mRNA level, unless specified 'at protein level'.<br></br>Examples: <a href="http://www.uniprot.org/uniprot/P92958#expression">P92958</a>, <a href="http://www.uniprot.org/uniprot/Q8TDN4#expression">Q8TDN4</a>, <a href="http://www.uniprot.org/uniprot/O14734#expression">O14734</a><p><a href='/help/tissue_specificity' target='_top'>More...</a></p>Tissue specificityi

Ubiquitous.3 Publications

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
O22315 baseline and differential

Genevisible search portal to normalized and curated expression data from Genevestigator

More...
Genevisiblei
O22315 AT

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction%5Fsection">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function%5Fsection">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Component of the spliceosome.

Interacts with SNRNP35, RS2Z33, SR34, CYP59, CYP63 and CYP95. The binding to CYP63 is phosphorylation-dependent (PubMed:15166240).

Interacts with MOS14 (PubMed:21738492).

5 Publications

<p>This subsection of the '<a href="http://www.uniprot.org/help/interaction%5Fsection%27">Interaction</a> section provides information about binary protein-protein interactions. The data presented in this section are a quality-filtered subset of binary interactions automatically derived from the <a href="https://www.ebi.ac.uk/intact/">IntAct database</a>. It is updated at every <a href="http://www.uniprot.org/help/synchronization">UniProt release</a>.<p><a href='/help/binary_interactions' target='_top'>More...</a></p>Binary interactionsi

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
24497, 13 interactors

Protein interaction database and analysis system

More...
IntActi
O22315, 11 interactors

STRING: functional protein association networks

More...
STRINGi
3702.AT1G02840.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
O22315

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini7 – 82RRM 1PROSITE-ProRule annotationAdd BLAST76
Domaini119 – 197RRM 2PROSITE-ProRule annotationAdd BLAST79

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi96 – 112Gly-rich (hinge region)Add BLAST17
Compositional biasi198 – 273Arg/Ser-rich (RS domain)Add BLAST76
Compositional biasi274 – 303Lys/Pro/Ser-richAdd BLAST30

<p>This subsection of the 'Family and domains' section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the splicing factor SR family. SR subfamily.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG0105 Eukaryota
COG0724 LUCA

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_012062_34_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
O22315

KEGG Orthology (KO)

More...
KOi
K12890

Identification of Orthologs from Complete Genome Data

More...
OMAi
ISSAANC

Database of Orthologous Groups

More...
OrthoDBi
1321443at2759

Database for complete collections of gene phylogenies

More...
PhylomeDBi
O22315

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.70.330, 2 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00076 RRM_1, 2 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00360 RRM, 2 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF54928 SSF54928, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50102 RRM, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequences (3)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry describes 3 <p>This subsection of the 'Sequence' section lists the alternative protein sequences (isoforms) that can be generated from the same gene by a single or by the combination of up to four biological events (alternative promoter usage, alternative splicing, alternative initiation and ribosomal frameshifting). Additionally, this section gives relevant information on each alternative protein isoform. This section is only present in reviewed entries, i.e. in UniProtKB/Swiss-Prot.<p><a href='/help/alternative_products' target='_top'>More...</a></p> isoformsi produced by alternative splicing. AlignAdd to basket
Isoform 1 (identifier: O22315-1) [UniParc]FASTAAdd to basket
Also known as: SF2A

This isoform has been chosen as the <div> <p><b>What is the canonical sequence?</b><p><a href='/help/canonical_and_isoforms' target='_top'>More...</a></p>canonicali sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MSSRSSRTVY VGNLPGDIRE REVEDLFSKY GPVVQIDLKV PPRPPGYAFV
60 70 80 90 100
EFDDARDAED AIHGRDGYDF DGHRLRVELA HGGRRSSDDT RGSFNGGGRG
110 120 130 140 150
GGRGRGDGGS RGPSRRSEFR VLVTGLPSSA SWQDLKDHMR KGGDVCFSQV
160 170 180 190 200
YRDARGTTGV VDYTCYEDMK YALKKLDDTE FRNAFSNGYV RVREYDSRKD
210 220 230 240 250
SRSPSRGRSY SKSRSRSRGR SVSRSRSRSR SRSRSPKAKS SRRSPAKSTS
260 270 280 290 300
RSPGPRSKSR SPSPRRSRSR SRSPLPSVQK EGSKSPSKPS PAKSPIHTRS

PSR
Length:303
Mass (Da):33,729
Last modified:January 1, 1998 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i6530F9CB628B8EFA
GO
Isoform 2 (identifier: O22315-2) [UniParc]FASTAAdd to basket
Also known as: SF2B

The sequence of this isoform differs from the canonical sequence as follows:
     267-272: SRSRSR → YGFTYD
     273-303: Missing.

Show »
Length:272
Mass (Da):30,509
Checksum:i3EDCF085D2003C05
GO
Isoform 3 (identifier: O22315-3) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     267-285: SRSRSRSPLPSVQKEGSKS → WITVETLDHLDHNIISGFL
     286-303: Missing.

Show »
Length:285
Mass (Da):31,967
Checksum:i85FC1FCAD24C9BF6
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section reports difference(s) between the canonical sequence (displayed by default in the entry) and the different sequence submissions merged in the entry. These various submissions may originate from different sequencing projects, different types of experiments, or different biological samples. Sequence conflicts are usually of unknown origin.<p><a href='/help/conflict' target='_top'>More...</a></p>Sequence conflicti125G → W in AAA32856 (PubMed:7644475).Curated1
Sequence conflicti127P → A in AAA32856 (PubMed:7644475).Curated1
Sequence conflicti139 – 140MR → IA in AAA32856 (PubMed:7644475).Curated2

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Sequence' section describes the sequence of naturally occurring alternative protein isoform(s). The changes in the amino acid sequence may be due to alternative splicing, alternative promoter usage, alternative initiation, or ribosomal frameshifting.<p><a href='/help/var_seq' target='_top'>More...</a></p>Alternative sequenceiVSP_054984267 – 285SRSRS…EGSKS → WITVETLDHLDHNIISGFL in isoform 3. 1 PublicationAdd BLAST19
Alternative sequenceiVSP_005859267 – 272SRSRSR → YGFTYD in isoform 2. Curated6
Alternative sequenceiVSP_005860273 – 303Missing in isoform 2. CuratedAdd BLAST31
Alternative sequenceiVSP_054985286 – 303Missing in isoform 3. 1 PublicationAdd BLAST18

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
M98340 mRNA Translation: AAA32856.1
AF001035 Genomic DNA Translation: AAB71385.1
AF001035 Genomic DNA Translation: AAB71386.1
AC009525 Genomic DNA Translation: AAF02881.1
CP002684 Genomic DNA Translation: AEE27477.1
CP002684 Genomic DNA Translation: AEE27478.1
CP002684 Genomic DNA Translation: AEE27479.2
CP002684 Genomic DNA Translation: ANM58907.1
CP002684 Genomic DNA Translation: ANM58908.1
AK118379 mRNA Translation: BAC42991.1
AY128338 mRNA Translation: AAM91541.1
BT006316 mRNA Translation: AAP13424.1
AY085920 mRNA Translation: AAM63132.1

Protein sequence database of the Protein Information Resource

More...
PIRi
F86158
S71185

NCBI Reference Sequences

More...
RefSeqi
NP_001318908.1, NM_001331357.1 [O22315-2]
NP_001321307.1, NM_001331358.1 [O22315-2]
NP_001321308.1, NM_001331359.1 [O22315-2]
NP_850933.1, NM_180602.2 [O22315-1]
NP_850934.1, NM_180603.1 [O22315-3]

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
AT1G02840.1; AT1G02840.1; AT1G02840 [O22315-1]
AT1G02840.2; AT1G02840.2; AT1G02840 [O22315-3]
AT1G02840.3; AT1G02840.3; AT1G02840 [O22315-2]
AT1G02840.4; AT1G02840.4; AT1G02840 [O22315-2]
AT1G02840.5; AT1G02840.5; AT1G02840 [O22315-2]

Database of genes from NCBI RefSeq genomes

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GeneIDi
839262

Gramene; a comparative resource for plants

More...
Gramenei
AT1G02840.1; AT1G02840.1; AT1G02840 [O22315-1]
AT1G02840.2; AT1G02840.2; AT1G02840 [O22315-3]
AT1G02840.3; AT1G02840.3; AT1G02840 [O22315-2]
AT1G02840.4; AT1G02840.4; AT1G02840 [O22315-2]
AT1G02840.5; AT1G02840.5; AT1G02840 [O22315-2]

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ath:AT1G02840

Keywords - Coding sequence diversityi

Alternative splicing

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
M98340 mRNA Translation: AAA32856.1
AF001035 Genomic DNA Translation: AAB71385.1
AF001035 Genomic DNA Translation: AAB71386.1
AC009525 Genomic DNA Translation: AAF02881.1
CP002684 Genomic DNA Translation: AEE27477.1
CP002684 Genomic DNA Translation: AEE27478.1
CP002684 Genomic DNA Translation: AEE27479.2
CP002684 Genomic DNA Translation: ANM58907.1
CP002684 Genomic DNA Translation: ANM58908.1
AK118379 mRNA Translation: BAC42991.1
AY128338 mRNA Translation: AAM91541.1
BT006316 mRNA Translation: AAP13424.1
AY085920 mRNA Translation: AAM63132.1
PIRiF86158
S71185
RefSeqiNP_001318908.1, NM_001331357.1 [O22315-2]
NP_001321307.1, NM_001331358.1 [O22315-2]
NP_001321308.1, NM_001331359.1 [O22315-2]
NP_850933.1, NM_180602.2 [O22315-1]
NP_850934.1, NM_180603.1 [O22315-3]

3D structure databases

SMRiO22315
ModBaseiSearch...

Protein-protein interaction databases

BioGridi24497, 13 interactors
IntActiO22315, 11 interactors
STRINGi3702.AT1G02840.1

PTM databases

iPTMnetiO22315

Proteomic databases

PaxDbiO22315
PRIDEiO22315

Genome annotation databases

EnsemblPlantsiAT1G02840.1; AT1G02840.1; AT1G02840 [O22315-1]
AT1G02840.2; AT1G02840.2; AT1G02840 [O22315-3]
AT1G02840.3; AT1G02840.3; AT1G02840 [O22315-2]
AT1G02840.4; AT1G02840.4; AT1G02840 [O22315-2]
AT1G02840.5; AT1G02840.5; AT1G02840 [O22315-2]
GeneIDi839262
GrameneiAT1G02840.1; AT1G02840.1; AT1G02840 [O22315-1]
AT1G02840.2; AT1G02840.2; AT1G02840 [O22315-3]
AT1G02840.3; AT1G02840.3; AT1G02840 [O22315-2]
AT1G02840.4; AT1G02840.4; AT1G02840 [O22315-2]
AT1G02840.5; AT1G02840.5; AT1G02840 [O22315-2]
KEGGiath:AT1G02840

Organism-specific databases

AraportiAT1G02840
TAIRilocus:2024770 AT1G02840

Phylogenomic databases

eggNOGiKOG0105 Eukaryota
COG0724 LUCA
HOGENOMiCLU_012062_34_0_1
InParanoidiO22315
KOiK12890
OMAiISSAANC
OrthoDBi1321443at2759
PhylomeDBiO22315

Miscellaneous databases

Protein Ontology

More...
PROi
PR:O22315

Gene expression databases

ExpressionAtlasiO22315 baseline and differential
GenevisibleiO22315 AT

Family and domain databases

Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiSR34_ARATH
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O22315
Secondary accession number(s): O22314
, Q39201, Q564E1, Q8L7P1
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: January 1, 1998
Last modified: April 22, 2020
This is version 150 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
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