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Protein

40S ribosomal protein S19

Gene

rps-19

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-CEL-72702 Ribosomal scanning and start codon recognition
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S19
Gene namesi
Name:rps-19
ORF Names:T05F1.3
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiT05F1.3 ; CE13265 ; WBGene00004488 ; rps-19

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001538231 – 14640S ribosomal protein S19Add BLAST146

Proteomic databases

EPDiO18650
PaxDbiO18650
PeptideAtlasiO18650
PRIDEiO18650

Expressioni

Gene expression databases

BgeeiWBGene00004488

Interactioni

Protein-protein interaction databases

BioGridi38230, 2 interactors
DIPiDIP-24437N
STRINGi6239.T05F1.3.2

Structurei

3D structure databases

ProteinModelPortaliO18650
SMRiO18650
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3411 Eukaryota
COG2238 LUCA
GeneTreeiENSGT00390000013102
HOGENOMiHOG000230649
InParanoidiO18650
KOiK02966
OMAiYIDGPVG
OrthoDBiEOG091G0QM7
PhylomeDBiO18650

Family and domain databases

Gene3Di1.10.10.2700, 1 hit
InterProiView protein in InterPro
IPR001266 Ribosomal_S19e
IPR018277 Ribosomal_S19e_CS
IPR038111 Ribosomal_S19e_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR11710 PTHR11710, 1 hit
PfamiView protein in Pfam
PF01090 Ribosomal_S19e, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD003854 Ribosomal_S19e, 1 hit
SMARTiView protein in SMART
SM01413 Ribosomal_S19e, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS00628 RIBOSOMAL_S19E, 1 hit

Sequencei

Sequence statusi: Complete.

O18650-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRATSIKDV DQHEATKSIA HFLKKSGKVK VPEWSDLVKL GVNKELAPVD
60 70 80 90 100
PDWFYTRAAS LARHLYFRPA GIGAFKKVYG GNKRRGVAPN HFQTSAGNCL
110 120 130 140
RKAVQQLEKI KWVEKHPDGK GRILSKQGRK DLDRIATSLR SSGQQA
Length:146
Mass (Da):16,322
Last modified:January 1, 1998 - v1
Checksum:iEA3F4040E89F9A04
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF016512 mRNA Translation: AAB69445.1
Z81586 Genomic DNA Translation: CAB04689.1
PIRiT24535
RefSeqiNP_492555.1, NM_060154.6
UniGeneiCel.34347
Cel.5599

Genome annotation databases

EnsemblMetazoaiT05F1.3; T05F1.3; WBGene00004488
GeneIDi172805
KEGGicel:CELE_T05F1.3
UCSCiT05F1.3.2 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRS19_CAEEL
AccessioniPrimary (citable) accession number: O18650
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 30, 2000
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 118 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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