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Protein
Submitted name:

Ribosomal Protein, Small subunit

Gene

rps-18

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-CEL-72702 Ribosomal scanning and start codon recognition
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal Protein, Small subunitImported
Gene namesi
Name:rps-18Imported
ORF Names:CELE_Y57G11C.16Imported, Y57G11C.16Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiY57G11C.16 ; CE14956 ; WBGene00004487 ; rps-18

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

EPDiO18240
PaxDbiO18240
PeptideAtlasiO18240

Expressioni

Gene expression databases

BgeeiWBGene00004487

Interactioni

Protein-protein interaction databases

DIPiDIP-25985N
STRINGi6239.Y57G11C.16.1

Structurei

3D structure databases

ProteinModelPortaliO18240
SMRiO18240
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS13 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3311 Eukaryota
COG0099 LUCA
GeneTreeiENSGT00390000012691
HOGENOMiHOG000039877
InParanoidiO18240
KOiK02964
OMAiHKRGQKV
OrthoDBiEOG091G0W4F
PhylomeDBiO18240

Family and domain databases

Gene3Di4.10.910.10, 1 hit
HAMAPiMF_01315 Ribosomal_S13_S18, 1 hit
InterProiView protein in InterPro
IPR027437 30s_Rbsml_prot_S13_C
IPR001892 Ribosomal_S13
IPR010979 Ribosomal_S13-like_H2TH
IPR018269 Ribosomal_S13_CS
PfamiView protein in Pfam
PF00416 Ribosomal_S13, 1 hit
PIRSFiPIRSF002134 Ribosomal_S13, 1 hit
SUPFAMiSSF46946 SSF46946, 1 hit
PROSITEiView protein in PROSITE
PS00646 RIBOSOMAL_S13_1, 1 hit
PS50159 RIBOSOMAL_S13_2, 1 hit

Sequencei

Sequence statusi: Complete.

O18240-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLIIPEKFQ HIHRVMNTNI DGNRKVPYAL TAIKGVGRRF AFVCCRKADV
60 70 80 90 100
DVNKRAGELT EEDFDKIVTI MQNPSQYKIP NWFLNRQKDI KDGKTGQLLS
110 120 130 140 150
TAVDNKLRED LERMKKIRLH RGLRHYWGLR VRGQHTKTTG RKGRTVGVSK

KKGG
Length:154
Mass (Da):17,771
Last modified:January 1, 1998 - v1
Checksum:i5A940C1D70839AFD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA Translation: CAB16517.1
PIRiT27228
RefSeqiNP_502794.1, NM_070393.4
UniGeneiCel.30551

Genome annotation databases

EnsemblMetazoaiY57G11C.16; Y57G11C.16; WBGene00004487
GeneIDi178408
KEGGicel:CELE_Y57G11C.16
UCSCiY57G11C.16.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiO18240_CAEEL
AccessioniPrimary (citable) accession number: O18240
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: May 23, 2018
This is version 137 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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