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Protein
Submitted name:

Serpentine Receptor, class H

Gene

srh-251

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Keywordsi

Molecular functionReceptorImported

Names & Taxonomyi

Protein namesi
Submitted name:
Serpentine Receptor, class HImported
Gene namesi
Name:srh-251Imported
ORF Names:CELE_R08H2.4Imported, R08H2.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiR08H2.4 ; CE12600 ; WBGene00005457 ; srh-251

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei13 – 36HelicalSequence analysisAdd BLAST24
Transmembranei56 – 86HelicalSequence analysisAdd BLAST31
Transmembranei92 – 111HelicalSequence analysisAdd BLAST20
Transmembranei131 – 151HelicalSequence analysisAdd BLAST21
Transmembranei186 – 210HelicalSequence analysisAdd BLAST25
Transmembranei231 – 254HelicalSequence analysisAdd BLAST24
Transmembranei266 – 290HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiO17987

Expressioni

Gene expression databases

BgeeiWBGene00005457 Expressed in 2 organ(s), highest expression level in material anatomical entity

Structurei

3D structure databases

ProteinModelPortaliO17987
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00390000000575
HOGENOMiHOG000016157
InParanoidiO17987
KOiK08473
OMAiSDITICL
OrthoDBiEOG091G03NT
PhylomeDBiO17987

Family and domain databases

InterProiView protein in InterPro
IPR019422 7TM_GPCR_serpentine_rcpt_Srh
PfamiView protein in Pfam
PF10318 7TM_GPCR_Srh, 1 hit

Sequencei

Sequence statusi: Complete.

O17987-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTSQSSNFAS PEFLLLATHI ITCFEIPLCI YGAYCIQFKT PVKMKSVKWV
60 70 80 90 100
MLNVHFWSTV SDITICLIGV PYLHIPCVAI HVLGFFDAPG EILYCLLTCL
110 120 130 140 150
LALGVSLIAI YENRFYATIG QNSIWHHLRK IYLPLMCIFP PISSLPVWTI
160 170 180 190 200
LPSQENARPC DETLFLENIH MVNKKIFILS VDPLVIVLWG VVCSCIITIP
210 220 230 240 250
IISFFTLTFL KLLERQRNHK YSFRTIQMQK NFLLSMSIQF GSFLMLIIIP
260 270 280 290 300
LILLHSSVIF WFHSQVLNNF ITIMFSSFGT GSPVVMIFVY KPYRQFTLSI
310 320
FRRNRKKESQ IDTIQVQSTI
Length:320
Mass (Da):36,866
Last modified:January 1, 1998 - v1
Checksum:i30918BF22EB1C201
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CAB04630.1
PIRiT24050
RefSeqiNP_506819.1, NM_074418.1
UniGeneiCel.27436

Genome annotation databases

EnsemblMetazoaiR08H2.4; R08H2.4; WBGene00005457
GeneIDi187711
KEGGicel:CELE_R08H2.4
UCSCiR08H2.4 c. elegans

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CAB04630.1
PIRiT24050
RefSeqiNP_506819.1, NM_074418.1
UniGeneiCel.27436

3D structure databases

ProteinModelPortaliO17987
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiO17987

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiR08H2.4; R08H2.4; WBGene00005457
GeneIDi187711
KEGGicel:CELE_R08H2.4
UCSCiR08H2.4 c. elegans

Organism-specific databases

CTDi187711
WormBaseiR08H2.4 ; CE12600 ; WBGene00005457 ; srh-251

Phylogenomic databases

GeneTreeiENSGT00390000000575
HOGENOMiHOG000016157
InParanoidiO17987
KOiK08473
OMAiSDITICL
OrthoDBiEOG091G03NT
PhylomeDBiO17987

Gene expression databases

BgeeiWBGene00005457 Expressed in 2 organ(s), highest expression level in material anatomical entity

Family and domain databases

InterProiView protein in InterPro
IPR019422 7TM_GPCR_serpentine_rcpt_Srh
PfamiView protein in Pfam
PF10318 7TM_GPCR_Srh, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiO17987_CAEEL
AccessioniPrimary (citable) accession number: O17987
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 1, 1998
Last modified: November 7, 2018
This is version 102 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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