clec-223

Functionⁱ

GO - Molecular functionⁱ

carbohydrate binding Source: UniProtKB-KW

View the complete GO annotation on QuickGO ...

Keywordsⁱ

Ligand	LectinImported

Ligand

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: C-type LECtinImported
Gene namesⁱ	Name:clec-223Imported ORF Names:C03E10.5Imported, CELE_C03E10.5Imported
Organismⁱ	Caenorhabditis elegansImported
Taxonomic identifierⁱ	6239 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis
Proteomesⁱ	UP000001940 Componentⁱ: Chromosome V

Organism-specific databases

WormBase More...WormBaseⁱ	C03E10.5 ; CE41608 ; WBGene00007282 ; clec-223

WormBaseⁱ

C03E10.5 ; CE41608 ; WBGene00007282 ; clec-223

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Signal peptideⁱ	1 – 19	Sequence analysisAdd BLAST		19
ChainⁱPRO_5004157459	20 – 1034	Sequence analysisAdd BLAST		1015

Proteomic databases

EPDⁱ	O17562
PaxDbⁱ	O17562
PeptideAtlas More...PeptideAtlasⁱ	O17562

Expressionⁱ

Gene expression databases

Bgeeⁱ	WBGene00007282 Expressed in 4 organ(s), highest expression level in adult organism

Bgeeⁱ

WBGene00007282 Expressed in 4 organ(s), highest expression level in adult organism

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Length
Domainⁱ	378 – 552	C-type lectinInterPro annotationAdd BLAST	175
Domainⁱ	640 – 805	C-type lectinInterPro annotationAdd BLAST	166
Domainⁱ	856 – 1011	C-type lectinInterPro annotationAdd BLAST	156

Keywords - Domainⁱ

SignalSequence analysis

Phylogenomic databases

eggNOGⁱ	KOG4297 Eukaryota ENOG410Z8KD LUCA
Ensembl GeneTree More...GeneTreeⁱ	ENSGT00860000135120
InParanoidⁱ	O17562
OMAⁱ	ADENEYN
Database of Orthologous Groups More...OrthoDBⁱ	EOG091G060L

Family and domain databases

Gene3Dⁱ	3.10.100.10, 2 hits
InterProⁱ	View protein in InterPro IPR001304 C-type_lectin-like IPR016186 C-type_lectin-like/link_sf IPR016187 CTDL_fold
SMARTⁱ	View protein in SMART SM00034 CLECT, 3 hits
SUPFAMⁱ	SSF56436 SSF56436, 3 hits

Sequenceⁱ

Sequence statusⁱ: Complete.

O17562-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MPKLLVLFIL SLYISPVESN FYKNYNKQYK PIYNYPPPPN VYYPPDYIYE 
        60         70         80         90        100
DYSPEDDYYQ GPPGPPGLEG PPGPNGPPGP DGPPGPPGPP AEKSTSTTTV 
       110        120        130        140        150
SPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP STSTETPTTE 
       160        170        180        190        200
STAAPSTSTE TPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP 
       210        220        230        240        250
STSTETPTTE STAAPSTSTE TPTTESTAAP STSTETPTTE STAAPSTSTE 
       260        270        280        290        300
TPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP STSTETPTTE 
       310        320        330        340        350
STAAPSTSTE TPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP 
       360        370        380        390        400
STSTETPTTK TTIGSTSTIS QSCIETECDD GWIKTLRGNN PQKTLCMKLF 
       410        420        430        440        450
SHDTSSYDDA SMYCYDSHQA FLTGPDSNDE YDKIMEQALN ISDQVSDSQS 
       460        470        480        490        500
MILIGLKRTT ECTTDSGEQD QNSICRRPKG FIWQDGLGET SNTLINQHFN 
       510        520        530        540        550
DDPGVETSPD HVRACTGIII VKGATNNKNV YSLDCSNGEK SSGEKSKMVV 
       560        570        580        590        600
CGKLGKCPAT TPSTISTTSG ASSSTASVSS TILSSTATTM VTSTPTTEKS 
       610        620        630        640        650
STTTTSTPTS EATSTTTAMI TTTSGTTENP TTTDCPTKVC RYGFHPTIRN 
       660        670        680        690        700
GKVWCIRVFF HFVLNYQDGS DYCWNYFHST LSGPADENEY NVLLDQTKTD 
       710        720        730        740        750
PSLVQSLTKY TKVFMVLGAQ RTPACLYESS SAQCEKPSGY QWLDNVTDTT 
       760        770        780        790        800
YAFTKFNEDQ PDTSPEQPEG CVGVLVYTDP TKRDKELVWS LSCNDAQSAH 
       810        820        830        840        850
QVVLKLVVCG HEGVCPEEST IPPPSTQSTT TMKSTTTATT SMSTTKKVCA 
       860        870        880        890        900
KSDLKCANGW TSFNRTSTNP FCFKVISSYN QSYEQSEALC AASGGYLSGV 
       910        920        930        940        950
ENITEYQFAV ELAKAAVDYS TSFNEKILVT IALKRKVICL QTDSTESCIT 
       960        970        980        990       1000
FKAYEFVDDK TKYVAILQHY SLWADNQPVI ISDQPHGCVG IMVTQSTSTS 
      1010       1020       1030 
GDSKLFSTRC ETGTQTYGMS NAAYCARVPD VCPP

Length:1,034

Mass (Da):109,733

Last modified:January 15, 2008 - v2

Checksum:ⁱ2FC42E4FBE2771DB

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	BX284605 Genomic DNA Translation: CAB03824.2
NCBI Reference Sequences More...RefSeqⁱ	NP_505863.2, NM_073462.4
UniGeneⁱ	Cel.9360

Genome annotation databases

EnsemblMetazoaⁱ	C03E10.5; C03E10.5; WBGene00007282
GeneIDⁱ	179561
KEGGⁱ	cel:CELE_C03E10.5
UCSC genome browser More...UCSCⁱ	C03E10.5 c. elegans

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	BX284605 Genomic DNA Translation: CAB03824.2
RefSeqⁱ	NP_505863.2, NM_073462.4
UniGeneⁱ	Cel.9360

3D structure databases

ModBaseⁱ	Search...
MobiDBⁱ	Search...

Proteomic databases

EPDⁱ	O17562
PaxDbⁱ	O17562
PeptideAtlasⁱ	O17562

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblMetazoaⁱ	C03E10.5; C03E10.5; WBGene00007282
GeneIDⁱ	179561
KEGGⁱ	cel:CELE_C03E10.5
UCSCⁱ	C03E10.5 c. elegans

Organism-specific databases

CTDⁱ	179561
WormBaseⁱ	C03E10.5 ; CE41608 ; WBGene00007282 ; clec-223

Phylogenomic databases

eggNOGⁱ	KOG4297 Eukaryota ENOG410Z8KD LUCA
GeneTreeⁱ	ENSGT00860000135120
InParanoidⁱ	O17562
OMAⁱ	ADENEYN
OrthoDBⁱ	EOG091G060L

Gene expression databases

Bgeeⁱ	WBGene00007282 Expressed in 4 organ(s), highest expression level in adult organism

Bgeeⁱ

WBGene00007282 Expressed in 4 organ(s), highest expression level in adult organism

Family and domain databases

Gene3Dⁱ	3.10.100.10, 2 hits
InterProⁱ	View protein in InterPro IPR001304 C-type_lectin-like IPR016186 C-type_lectin-like/link_sf IPR016187 CTDL_fold
SMARTⁱ	View protein in SMART SM00034 CLECT, 3 hits
SUPFAMⁱ	SSF56436 SSF56436, 3 hits
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	O17562_CAEEL
Accessionⁱ	O17562Primary (citable) accession number: O17562
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	January 1, 1998
	Last sequence update:	January 15, 2008
	Last modified:	September 12, 2018
	This is version 109 of the entry and version 2 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

UniProtKB - O17562 (O17562_CAEEL)

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C-type LECtin

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Functionⁱ

GO - Molecular functionⁱ

Keywordsⁱ

Names & Taxonomyⁱ

Organism-specific databases

PTM / Processingⁱ

Molecule processing

Proteomic databases

Expressionⁱ

Gene expression databases

Family & Domainsⁱ

Domains and Repeats

Keywords - Domainⁱ

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Cross-referencesⁱ

Sequence databases

3D structure databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProt is an ELIXIR core data resource

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - O17562 (O17562_CAEEL)

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C-type LECtin

clec-223

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<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

Organism-specific databases

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Proteomic databases

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Keywords - Domaini

Phylogenomic databases

Family and domain databases

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Proteomic databases

Protocols and materials databases

Genome annotation databases

Organism-specific databases

Phylogenomic databases

Gene expression databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

UniProt is an ELIXIR core data resource

Your basket is currently empty. ⁱ

Functionⁱ

GO - Molecular functionⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Expressionⁱ

Family & Domainsⁱ

Keywords - Domainⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ