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Protein
Submitted name:

C-type LECtin

Gene

clec-223

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandLectinImported

Names & Taxonomyi

Protein namesi
Submitted name:
C-type LECtinImported
Gene namesi
Name:clec-223Imported
ORF Names:C03E10.5Imported, CELE_C03E10.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiC03E10.5 ; CE41608 ; WBGene00007282 ; clec-223

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 19Sequence analysisAdd BLAST19
ChainiPRO_500415745920 – 1034Sequence analysisAdd BLAST1015

Proteomic databases

EPDiO17562
PaxDbiO17562
PeptideAtlasiO17562

Expressioni

Gene expression databases

BgeeiWBGene00007282

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini378 – 552C-type lectinInterPro annotationAdd BLAST175
Domaini640 – 805C-type lectinInterPro annotationAdd BLAST166
Domaini856 – 1011C-type lectinInterPro annotationAdd BLAST156

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG4297 Eukaryota
ENOG410Z8KD LUCA
GeneTreeiENSGT00860000135120
InParanoidiO17562
OMAiADENEYN
OrthoDBiEOG091G060L

Family and domain databases

Gene3Di3.10.100.10, 2 hits
InterProiView protein in InterPro
IPR001304 C-type_lectin-like
IPR016186 C-type_lectin-like/link_sf
IPR016187 CTDL_fold
SMARTiView protein in SMART
SM00034 CLECT, 3 hits
SUPFAMiSSF56436 SSF56436, 3 hits

Sequencei

Sequence statusi: Complete.

O17562-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPKLLVLFIL SLYISPVESN FYKNYNKQYK PIYNYPPPPN VYYPPDYIYE
60 70 80 90 100
DYSPEDDYYQ GPPGPPGLEG PPGPNGPPGP DGPPGPPGPP AEKSTSTTTV
110 120 130 140 150
SPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP STSTETPTTE
160 170 180 190 200
STAAPSTSTE TPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP
210 220 230 240 250
STSTETPTTE STAAPSTSTE TPTTESTAAP STSTETPTTE STAAPSTSTE
260 270 280 290 300
TPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP STSTETPTTE
310 320 330 340 350
STAAPSTSTE TPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP
360 370 380 390 400
STSTETPTTK TTIGSTSTIS QSCIETECDD GWIKTLRGNN PQKTLCMKLF
410 420 430 440 450
SHDTSSYDDA SMYCYDSHQA FLTGPDSNDE YDKIMEQALN ISDQVSDSQS
460 470 480 490 500
MILIGLKRTT ECTTDSGEQD QNSICRRPKG FIWQDGLGET SNTLINQHFN
510 520 530 540 550
DDPGVETSPD HVRACTGIII VKGATNNKNV YSLDCSNGEK SSGEKSKMVV
560 570 580 590 600
CGKLGKCPAT TPSTISTTSG ASSSTASVSS TILSSTATTM VTSTPTTEKS
610 620 630 640 650
STTTTSTPTS EATSTTTAMI TTTSGTTENP TTTDCPTKVC RYGFHPTIRN
660 670 680 690 700
GKVWCIRVFF HFVLNYQDGS DYCWNYFHST LSGPADENEY NVLLDQTKTD
710 720 730 740 750
PSLVQSLTKY TKVFMVLGAQ RTPACLYESS SAQCEKPSGY QWLDNVTDTT
760 770 780 790 800
YAFTKFNEDQ PDTSPEQPEG CVGVLVYTDP TKRDKELVWS LSCNDAQSAH
810 820 830 840 850
QVVLKLVVCG HEGVCPEEST IPPPSTQSTT TMKSTTTATT SMSTTKKVCA
860 870 880 890 900
KSDLKCANGW TSFNRTSTNP FCFKVISSYN QSYEQSEALC AASGGYLSGV
910 920 930 940 950
ENITEYQFAV ELAKAAVDYS TSFNEKILVT IALKRKVICL QTDSTESCIT
960 970 980 990 1000
FKAYEFVDDK TKYVAILQHY SLWADNQPVI ISDQPHGCVG IMVTQSTSTS
1010 1020 1030
GDSKLFSTRC ETGTQTYGMS NAAYCARVPD VCPP
Length:1,034
Mass (Da):109,733
Last modified:January 15, 2008 - v2
Checksum:i2FC42E4FBE2771DB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CAB03824.2
RefSeqiNP_505863.2, NM_073462.4
UniGeneiCel.9360

Genome annotation databases

EnsemblMetazoaiC03E10.5; C03E10.5; WBGene00007282
GeneIDi179561
KEGGicel:CELE_C03E10.5
UCSCiC03E10.5 c. elegans

Entry informationi

Entry nameiO17562_CAEEL
AccessioniPrimary (citable) accession number: O17562
Entry historyiIntegrated into UniProtKB/TrEMBL: January 1, 1998
Last sequence update: January 15, 2008
Last modified: February 28, 2018
This is version 108 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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