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UniProtKB - O17562 (O17562_CAEEL)
Protein
Submitted name:
C-type LECtin
Gene
clec-223
Organism
Caenorhabditis elegans
Status
Functioni
GO - Molecular functioni
- carbohydrate binding Source: UniProtKB-KW
Keywordsi
Ligand | LectinImported |
Names & Taxonomyi
Protein namesi | Submitted name: C-type LECtinImported |
Gene namesi | Name:clec-223Imported ORF Names:C03E10.5Imported, CELE_C03E10.5Imported |
Organismi | Caenorhabditis elegansImported |
Taxonomic identifieri | 6239 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditina › Rhabditomorpha › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis |
Proteomesi |
|
Organism-specific databases
WormBasei | C03E10.5 ; CE41608 ; WBGene00007282 ; clec-223 |
PTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Signal peptidei | 1 – 19 | Sequence analysisAdd BLAST | 19 | |
ChainiPRO_5004157459 | 20 – 1034 | Sequence analysisAdd BLAST | 1015 |
Proteomic databases
EPDi | O17562 |
PaxDbi | O17562 |
PeptideAtlasi | O17562 |
Expressioni
Gene expression databases
Bgeei | WBGene00007282, Expressed in adult organism and 4 other tissues |
Structurei
3D structure databases
AlphaFoldDBi | O17562 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 378 – 552 | C-type lectinInterPro annotationAdd BLAST | 175 | |
Domaini | 640 – 805 | C-type lectinInterPro annotationAdd BLAST | 166 | |
Domaini | 856 – 1011 | C-type lectinInterPro annotationAdd BLAST | 156 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 44 – 368 | DisorderedSequence analysisAdd BLAST | 325 | |
Regioni | 588 – 632 | DisorderedSequence analysisAdd BLAST | 45 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 59 – 91 | Pro residuesSequence analysisAdd BLAST | 33 | |
Compositional biasi | 92 – 368 | Polar residuesSequence analysisAdd BLAST | 277 |
Keywords - Domaini
SignalSequence analysisARBA annotationPhylogenomic databases
eggNOGi | KOG4297, Eukaryota |
GeneTreei | ENSGT01030000237609 |
HOGENOMi | CLU_003739_0_0_1 |
InParanoidi | O17562 |
OMAi | HDEICIP |
OrthoDBi | 962918at2759 |
Family and domain databases
Gene3Di | 3.10.100.10, 2 hits |
InterProi | View protein in InterPro IPR001304, C-type_lectin-like IPR016186, C-type_lectin-like/link_sf IPR016187, CTDL_fold |
SMARTi | View protein in SMART SM00034, CLECT, 3 hits |
SUPFAMi | SSF56436, SSF56436, 3 hits |
i Sequence
Sequence statusi: Complete.
O17562-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MPKLLVLFIL SLYISPVESN FYKNYNKQYK PIYNYPPPPN VYYPPDYIYE
60 70 80 90 100
DYSPEDDYYQ GPPGPPGLEG PPGPNGPPGP DGPPGPPGPP AEKSTSTTTV
110 120 130 140 150
SPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP STSTETPTTE
160 170 180 190 200
STAAPSTSTE TPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP
210 220 230 240 250
STSTETPTTE STAAPSTSTE TPTTESTAAP STSTETPTTE STAAPSTSTE
260 270 280 290 300
TPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP STSTETPTTE
310 320 330 340 350
STAAPSTSTE TPTTESTAAP STSTETPTTE STAAPSTSTE TPTTESTAAP
360 370 380 390 400
STSTETPTTK TTIGSTSTIS QSCIETECDD GWIKTLRGNN PQKTLCMKLF
410 420 430 440 450
SHDTSSYDDA SMYCYDSHQA FLTGPDSNDE YDKIMEQALN ISDQVSDSQS
460 470 480 490 500
MILIGLKRTT ECTTDSGEQD QNSICRRPKG FIWQDGLGET SNTLINQHFN
510 520 530 540 550
DDPGVETSPD HVRACTGIII VKGATNNKNV YSLDCSNGEK SSGEKSKMVV
560 570 580 590 600
CGKLGKCPAT TPSTISTTSG ASSSTASVSS TILSSTATTM VTSTPTTEKS
610 620 630 640 650
STTTTSTPTS EATSTTTAMI TTTSGTTENP TTTDCPTKVC RYGFHPTIRN
660 670 680 690 700
GKVWCIRVFF HFVLNYQDGS DYCWNYFHST LSGPADENEY NVLLDQTKTD
710 720 730 740 750
PSLVQSLTKY TKVFMVLGAQ RTPACLYESS SAQCEKPSGY QWLDNVTDTT
760 770 780 790 800
YAFTKFNEDQ PDTSPEQPEG CVGVLVYTDP TKRDKELVWS LSCNDAQSAH
810 820 830 840 850
QVVLKLVVCG HEGVCPEEST IPPPSTQSTT TMKSTTTATT SMSTTKKVCA
860 870 880 890 900
KSDLKCANGW TSFNRTSTNP FCFKVISSYN QSYEQSEALC AASGGYLSGV
910 920 930 940 950
ENITEYQFAV ELAKAAVDYS TSFNEKILVT IALKRKVICL QTDSTESCIT
960 970 980 990 1000
FKAYEFVDDK TKYVAILQHY SLWADNQPVI ISDQPHGCVG IMVTQSTSTS
1010 1020 1030
GDSKLFSTRC ETGTQTYGMS NAAYCARVPD VCPP
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX284605 Genomic DNA Translation: CAB03824.2 |
RefSeqi | NP_505863.2, NM_073462.4 |
Genome annotation databases
EnsemblMetazoai | C03E10.5.1; C03E10.5.1; WBGene00007282 |
GeneIDi | 179561 |
KEGGi | cel:CELE_C03E10.5 |
UCSCi | C03E10.5, c. elegans |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | BX284605 Genomic DNA Translation: CAB03824.2 |
RefSeqi | NP_505863.2, NM_073462.4 |
3D structure databases
AlphaFoldDBi | O17562 |
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 6239.C03E10.5 |
Proteomic databases
EPDi | O17562 |
PaxDbi | O17562 |
PeptideAtlasi | O17562 |
Genome annotation databases
EnsemblMetazoai | C03E10.5.1; C03E10.5.1; WBGene00007282 |
GeneIDi | 179561 |
KEGGi | cel:CELE_C03E10.5 |
UCSCi | C03E10.5, c. elegans |
Organism-specific databases
CTDi | 179561 |
WormBasei | C03E10.5 ; CE41608 ; WBGene00007282 ; clec-223 |
Phylogenomic databases
eggNOGi | KOG4297, Eukaryota |
GeneTreei | ENSGT01030000237609 |
HOGENOMi | CLU_003739_0_0_1 |
InParanoidi | O17562 |
OMAi | HDEICIP |
OrthoDBi | 962918at2759 |
Gene expression databases
Bgeei | WBGene00007282, Expressed in adult organism and 4 other tissues |
Family and domain databases
Gene3Di | 3.10.100.10, 2 hits |
InterProi | View protein in InterPro IPR001304, C-type_lectin-like IPR016186, C-type_lectin-like/link_sf IPR016187, CTDL_fold |
SMARTi | View protein in SMART SM00034, CLECT, 3 hits |
SUPFAMi | SSF56436, SSF56436, 3 hits |
MobiDBi | Search... |
Entry informationi
Entry namei | O17562_CAEEL | |
Accessioni | O17562Primary (citable) accession number: O17562 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | January 1, 1998 |
Last sequence update: | January 15, 2008 | |
Last modified: | May 25, 2022 | |
This is version 125 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |