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Entry version 107 (07 Apr 2021)
Sequence version 2 (06 Dec 2002)
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Protein

Uncharacterized protein C328.01c

Gene

SPAC328.01c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Uncharacterized protein C328.01c
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:SPAC328.01c, SPAC3A11.01
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri284812 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002485 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome I

Organism-specific databases

Schizosaccharomyces pombe database

More...
PomBasei
SPAC328.01c

Eukaryotic Pathogen, Vector and Host Database Resources

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VEuPathDBi
FungiDB:SPAC328.01c

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001168341 – 1234Uncharacterized protein C328.01cAdd BLAST1234

Proteomic databases

MaxQB - The MaxQuant DataBase

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MaxQBi
O14116

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
O14116

PRoteomics IDEntifications database

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PRIDEi
O14116

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
O14116

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

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BioGRIDi
279047, 56 interactors

STRING: functional protein association networks

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STRINGi
4896.SPAC328.01c.1

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

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eggNOGi
KOG2020, Eukaryota

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_267475_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
O14116

Identification of Orthologs from Complete Genome Data

More...
OMAi
WPDDPDR

Database for complete collections of gene phylogenies

More...
PhylomeDBi
O14116

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
1.25.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR013598, Exportin-1/Importin-b-like
IPR040018, XPO5

The PANTHER Classification System

More...
PANTHERi
PTHR11223:SF3, PTHR11223:SF3, 1 hit

Pfam protein domain database

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Pfami
View protein in Pfam
PF08389, Xpo1, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48371, SSF48371, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

O14116-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDEKGLSNIL QALNVVHSPE SSRETRFSAQ QLLDELKDSY SSPSVAIQLL
60 70 80 90 100
ELNEQAFSSL GCKLDIHIVQ HFSLSLFETS VGMNWKSFSN KEKESVTSFL
110 120 130 140 150
CKISLEDNNL LSVHFVRSKL ASVFIEIAKR DWYNTWREEF DSFLQSLWSL
160 170 180 190 200
SLQHRQLSSL ILRGIMEDLY QYDDPVASLR SHILFNALIS ILSSSSTLHK
210 220 230 240 250
LYPSGLPYSV TIPSNNEGWL IRWGNALESQ DDALECLKCF KSCLSWVATD
260 270 280 290 300
SIREANIVSH ICQILVQGPI FLKTHAIDCI YICVTRTMEI DDPLWEIVEE
310 320 330 340 350
MLSPSSLYTL HQVYTATSES INIKTLSSTT PEYILLKKLS ETIVALGQYN
360 370 380 390 400
YLDSNRRKCI KLTSLDTYSL LVLEIMKHPS LLISAISQHF WVLALRDPII
410 420 430 440 450
SKHEKFQIVY PELLSIASER LLRFEDAVVE LIPESATAKY LQEDVEGVSA
460 470 480 490 500
VHSFCGNFRR FMFDIVRLTV SITPIESLNW IQNRFQSTVL GNMEDIQSQT
510 520 530 540 550
EFFSKTSPLY LTMDVGFSTI EAFLHGVTRW NENTSDDPAT YEIILQNLFL
560 570 580 590 600
WCKQLVEINF KDPMLITRLI SVLVLFTSIL ARENTTLLGV VLEKIISAVT
610 620 630 640 650
YDNTSASYGF SDVQKINEMR SRCCFELVRL GELMPNPLMN IFDQLQSIID
660 670 680 690 700
QLDNATTLTG SEIVMLKTFL FVITQFSDVN IEVKNEYFEK LVGPVVKTWL
710 720 730 740 750
DVQPPVNSPM EFLNHIGFPQ MAEYLSAKYP YNADYTQFEL DADAASYQSN
760 770 780 790 800
LETGRKWLWP IKCLGRFCEA TCSNKHIHPS EFEGQKNLWQ VILPNVVPNL
810 820 830 840 850
LKLVEQLHCC YEPSFISGLG MHNSSILQKS IVERFWLHGV SQISKNQFLE
860 870 880 890 900
ESYKMDVSAN KLIHSFGHFL RRLREYCYYA IASFMRLGQA FFCVPGLSKQ
910 920 930 940 950
FLTAFFSHAA GLSLHQWTSM VNVVIKPYCV NCPAELRDEC LLPLLPALLS
960 970 980 990 1000
ELDHKLVSEW RRINDRGLLV EEDAEETGED DDLSEEMIEE SLLRHLTYAT
1010 1020 1030 1040 1050
AKLITETFLQ ITPTQSRSNV SSSLIGKETV EGPVKLSEYV LDNAIICEPL
1060 1070 1080 1090 1100
LCTLCHLLVI HDSRTVGLVV NAFLAITPLL VSEQAHSLVR EFICQQVFQS
1110 1120 1130 1140 1150
VILAIHDPYF ESMQSDFIRL ACIILSYSQG ITDSAFQLLA SIPALANQEN
1160 1170 1180 1190 1200
LVPAFFNKFR EASTLKIQKA LLTRLLNSGR IVPRTDRRAV NAAILDVSAK
1210 1220 1230
EMLKRFEKSV SLQDEQKNDV LSRDEDTGLA NLFE
Length:1,234
Mass (Da):140,421
Last modified:December 6, 2002 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i9A1CA058151F528F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAB16390.1
AB017490 Genomic DNA Translation: BAA33048.1

NCBI Reference Sequences

More...
RefSeqi
NP_594202.2, NM_001019626.2

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
SPAC328.01c.1; SPAC328.01c.1:pep; SPAC328.01c

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
2542592

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
spo:SPAC328.01c

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAB16390.1
AB017490 Genomic DNA Translation: BAA33048.1
RefSeqiNP_594202.2, NM_001019626.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

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SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

BioGRIDi279047, 56 interactors
STRINGi4896.SPAC328.01c.1

PTM databases

iPTMnetiO14116

Proteomic databases

MaxQBiO14116
PaxDbiO14116
PRIDEiO14116

Genome annotation databases

EnsemblFungiiSPAC328.01c.1; SPAC328.01c.1:pep; SPAC328.01c
GeneIDi2542592
KEGGispo:SPAC328.01c

Organism-specific databases

PomBaseiSPAC328.01c
VEuPathDBiFungiDB:SPAC328.01c

Phylogenomic databases

eggNOGiKOG2020, Eukaryota
HOGENOMiCLU_267475_0_0_1
InParanoidiO14116
OMAiWPDDPDR
PhylomeDBiO14116

Miscellaneous databases

Protein Ontology

More...
PROi
PR:O14116

Family and domain databases

Gene3Di1.25.10.10, 1 hit
InterProiView protein in InterPro
IPR011989, ARM-like
IPR016024, ARM-type_fold
IPR013598, Exportin-1/Importin-b-like
IPR040018, XPO5
PANTHERiPTHR11223:SF3, PTHR11223:SF3, 1 hit
PfamiView protein in Pfam
PF08389, Xpo1, 1 hit
SUPFAMiSSF48371, SSF48371, 1 hit

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiYKX1_SCHPO
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O14116
Secondary accession number(s): Q9P3U5, Q9URK5
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 6, 2002
Last sequence update: December 6, 2002
Last modified: April 7, 2021
This is version 107 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
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