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Protein

Uncharacterized protein C17G6.02c

Gene

SPAC17G6.02c

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C17G6.02c
Gene namesi
ORF Names:SPAC17G6.02c
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome I

Organism-specific databases

EuPathDBiFungiDB:SPAC17G6.02c
PomBaseiSPAC17G6.02c

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei14 – 34HelicalSequence analysisAdd BLAST21
Transmembranei40 – 60HelicalSequence analysisAdd BLAST21
Transmembranei72 – 92HelicalSequence analysisAdd BLAST21
Transmembranei115 – 135HelicalSequence analysisAdd BLAST21
Transmembranei156 – 176HelicalSequence analysisAdd BLAST21
Transmembranei206 – 223HelicalSequence analysisAdd BLAST18
Transmembranei238 – 258HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001167261 – 324Uncharacterized protein C17G6.02cAdd BLAST324

Proteomic databases

PaxDbiO13780
PRIDEiO13780

PTM databases

iPTMnetiO13780

Interactioni

Protein-protein interaction databases

BioGridi278756, 10 interactors
STRINGi4896.SPAC17G6.02c.1

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

InParanoidiO13780
OMAiEAIGWAG
OrthoDBiEOG092C3EMZ
PhylomeDBiO13780

Family and domain databases

InterProiView protein in InterPro
IPR007568 RTA1
PANTHERiPTHR31465 PTHR31465, 1 hit
PfamiView protein in Pfam
PF04479 RTA1, 1 hit

Sequencei

Sequence statusi: Complete.

O13780-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYYDNAFGYI PAHWVTILAV ILFSIAFILH VACLAFTRKW LVIVPIIGTI
60 70 80 90 100
GELAGWACRL DASYNPDDYN AFLGQIIALI IAPVFYSAQA YVLFHHIVLL
110 120 130 140 150
YGPRFSVLSP KLYGGIFITF DIIALILQAA GGGVAGGADS GSQLQTQGSQ
160 170 180 190 200
IMLGGICFQL FTIVVFSILF SIFFIALYTH HPIRPSTGRR EPDVPYTRVR
210 220 230 240 250
TMSCNCLALA TFAMVVRSVY RVIELAQGWE GAVITHEVWF DIFDFIPMIF
260 270 280 290 300
TSALLIPSLY PALERSKLPF TEKHVSSMEY APSEYGPSEY GPSINDITNM
310 320
SAVIYPDSFL APKDPKKSFS SEEL
Length:324
Mass (Da):35,930
Last modified:January 1, 1998 - v1
Checksum:i3DA93A397C4C0C0B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAB16213.1
AB027898 Genomic DNA Translation: BAA87202.1
PIRiT37834
RefSeqiNP_594249.1, NM_001019672.2

Genome annotation databases

EnsemblFungiiSPAC17G6.02c.1; SPAC17G6.02c.1:pep; SPAC17G6.02c
GeneIDi2542288
KEGGispo:SPAC17G6.02c

Similar proteinsi

Entry informationi

Entry nameiYEO2_SCHPO
AccessioniPrimary (citable) accession number: O13780
Secondary accession number(s): Q9USB2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: January 1, 1998
Last modified: February 28, 2018
This is version 98 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names

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