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Protein

Ubp5-interacting protein ftp105

Gene

ftp105

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Required for the localization of ubp5 to the Golgi apparatus. Involved in detoxification of cadmium ion.2 Publications

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

  • intracellular protein transport Source: GO_Central

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Ubp5-interacting protein ftp105
Alternative name(s):
Down-regulated in multiple cancers 1 homolog 3
Hid-1 family protein ftp105
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:ftp105
ORF Names:SPAC17A5.16
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri284812 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002485 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome I

Organism-specific databases

Eukaryotic Pathogen Database Resources

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EuPathDBi
FungiDB:SPAC17A5.16

Schizosaccharomyces pombe database

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PomBasei
SPAC17A5.16 ftp105

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Cytoplasm, Golgi apparatus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00001167101 – 925Ubp5-interacting protein ftp105Add BLAST925

Proteomic databases

MaxQB - The MaxQuant DataBase

More...
MaxQBi
O13776

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
O13776

PRoteomics IDEntifications database

More...
PRIDEi
O13776

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
O13776

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

Interacts with ubp5.1 Publication

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGrid)

More...
BioGridi
278643, 90 interactors

STRING: functional protein association networks

More...
STRINGi
4896.SPAC17A5.16.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi698 – 702Poly-Ser5

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the hid-1 family.Curated

Phylogenomic databases

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
O13776

Identification of Orthologs from Complete Genome Data

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OMAi
GNFNLVY

Database of Orthologous Groups

More...
OrthoDBi
EOG092C0SA0

Database for complete collections of gene phylogenies

More...
PhylomeDBi
O13776

Family and domain databases

Integrated resource of protein families, domains and functional sites

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InterProi
View protein in InterPro
IPR026705 Hid-1/Ecm30

The PANTHER Classification System

More...
PANTHERi
PTHR21575 PTHR21575, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF12722 Hid1, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

O13776-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGGQESKLAF QRGIARLASQ PDIPLDDEVW VSLWSVPESC PEVYDFFPPG
60 70 80 90 100
LIREMRDHAF VNLEKLLLVL TSRLFALKND KKFPNPETAP ASEALNCIRL
110 120 130 140 150
LTRIIPFLNE KLDLEEWHQK FWWSLRKKRN LPKENSELDL SNFQDDLDFE
160 170 180 190 200
NSISQKNEFS QKSPSVPLSP VSTFPASSIS LDASSDVSAA DVSVGGSSTI
210 220 230 240 250
KEIGSIEETF THEKTLMEEL LDTVFRLLFC RGFTLPLSSP EQYAYIIWEN
260 270 280 290 300
GIGTTETQEK TTKELAFNRI EVLRLLLVLI SKRLYRSSEV ASHTLTYLTC
310 320 330 340 350
VANKQLILVF LYSLINTTLR LRPDSWKASY STLVPYNDSS IALSKLTSQI
360 370 380 390 400
LLLFLDHTPH ETTVEYFRQR LNLSPGAAIE NQYRLYFSRL QLQADYEFLV
410 420 430 440 450
NELYRLLNAP VSAISAYISI VQKPNIAFPE IILFLWQAIL YNKRFRAFLI
460 470 480 490 500
TSPYATEFLT SIQFYALRYR EDNEHSGLVR ICLFIVHYLS CEKVLCEKLN
510 520 530 540 550
RNCMNAQSLM SSLGFSVPPM SYAEFLIISS FHISAVKRSP FSSLSPVILL
560 570 580 590 600
TICNIAPFVE NLSFVTCAKL MQLCSSLSSP RFLFRNPRNH LLLEYLLQAI
610 620 630 640 650
SSIVENKFSQ NPNLSYSIIR LQQVFLNLNS MKLPAVAQTK SQPLVALNSE
660 670 680 690 700
GSSDFESKSS DNTSLDGTPL QNTDFKKVAT VEDDSPFDEL DKFSSPFSSS
710 720 730 740 750
SSRGGLSHIS SRNVSISVPT VLQDVFSDSP LVLSRKLRGK IPENVSSSEL
760 770 780 790 800
IKKCASNPFG KDLEIDSNLF APSNSWFNSW HSRLELDSIL AIISQFSLPV
810 820 830 840 850
YKKMNEELST TDEAVKLLAN SVLNDVHPRV PNFRYFIWSV PMNNWFQSLV
860 870 880 890 900
WLYTLSFDEK GLMATPSLFT TSKVYKQHGN IMKVASPENS SNSMENATKS
910 920
ILDKLDLLYL QLPSSVNHDS SLRNK
Length:925
Mass (Da):104,836
Last modified:May 30, 2000 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i432E7B468699246F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAB11516.1

Protein sequence database of the Protein Information Resource

More...
PIRi
T37831

NCBI Reference Sequences

More...
RefSeqi
NP_593484.1, NM_001018917.2

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
SPAC17A5.16.1; SPAC17A5.16.1:pep; SPAC17A5.16

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
2542168

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
spo:SPAC17A5.16

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329670 Genomic DNA Translation: CAB11516.1
PIRiT37831
RefSeqiNP_593484.1, NM_001018917.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protein-protein interaction databases

BioGridi278643, 90 interactors
STRINGi4896.SPAC17A5.16.1

PTM databases

iPTMnetiO13776

Proteomic databases

MaxQBiO13776
PaxDbiO13776
PRIDEiO13776

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiSPAC17A5.16.1; SPAC17A5.16.1:pep; SPAC17A5.16
GeneIDi2542168
KEGGispo:SPAC17A5.16

Organism-specific databases

EuPathDBiFungiDB:SPAC17A5.16
PomBaseiSPAC17A5.16 ftp105

Phylogenomic databases

InParanoidiO13776
OMAiGNFNLVY
OrthoDBiEOG092C0SA0
PhylomeDBiO13776

Miscellaneous databases

Protein Ontology

More...
PROi
PR:O13776

Family and domain databases

InterProiView protein in InterPro
IPR026705 Hid-1/Ecm30
PANTHERiPTHR21575 PTHR21575, 1 hit
PfamiView protein in Pfam
PF12722 Hid1, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiFT105_SCHPO
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O13776
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: May 30, 2000
Last modified: November 7, 2018
This is version 103 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
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