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Entry version 138 (17 Jun 2020)
Sequence version 2 (01 Mar 2004)
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Protein

Dilute domain-containing protein YPR089W

Gene

YPR089W

Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Status
Reviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Miscellaneous

Present with 3690 molecules/cell in log phase SD medium.1 Publication

Enzyme and pathway databases

BioCyc Collection of Pathway/Genome Databases

More...
BioCyci
YEAST:G3O-34232-MONOMER

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Dilute domain-containing protein YPR089W
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Ordered Locus Names:YPR089W
ORF Names:YPR090W
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri559292 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeSaccharomyces
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000002311 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome XVI

Organism-specific databases

Eukaryotic Pathogen Database Resources

More...
EuPathDBi
FungiDB:YPR089W

Saccharomyces Genome Database

More...
SGDi
S000006293 YPR089W

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Cellular componenti

Golgi apparatus

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'PTM / Processing' section describes the extent of a polypeptide chain in the mature protein following processing or proteolytic cleavage.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_00002578251 – 888Dilute domain-containing protein YPR089WAdd BLAST888

Proteomic databases

MaxQB - The MaxQuant DataBase

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MaxQBi
O13585

PaxDb, a database of protein abundance averages across all three domains of life

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PaxDbi
O13585

PRoteomics IDEntifications database

More...
PRIDEi
O13585

PTM databases

iPTMnet integrated resource for PTMs in systems biology context

More...
iPTMneti
O13585

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

The Biological General Repository for Interaction Datasets (BioGRID)

More...
BioGRIDi
36259, 248 interactors

Database of interacting proteins

More...
DIPi
DIP-34618N

Protein interaction database and analysis system

More...
IntActi
O13585, 14 interactors

STRING: functional protein association networks

More...
STRINGi
4932.YPR089W

Miscellaneous databases

RNAct, Protein-RNA interaction predictions for model organisms.

More...
RNActi
O13585 protein

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

SWISS-MODEL Repository - a database of annotated 3D protein structure models

More...
SMRi
O13585

Database of comparative protein structure models

More...
ModBasei
Search...

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini360 – 745DilutePROSITE-ProRule annotationAdd BLAST386

Phylogenomic databases

The HOGENOM Database of Homologous Genes from Fully Sequenced Organisms

More...
HOGENOMi
CLU_019651_0_0_1

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
O13585

KEGG Orthology (KO)

More...
KOi
K06867

Identification of Orthologs from Complete Genome Data

More...
OMAi
LYAKDWN

Family and domain databases

Conserved Domains Database

More...
CDDi
cd15473 Myo5p-like_CBD_DIL_ANK, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.20, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR036770 Ankyrin_rpt-contain_sf
IPR002710 Dilute_dom
IPR037986 Myo5p-like_CBD_DIL

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01843 DIL, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01132 DIL, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48403 SSF48403, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51126 DILUTE, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

O13585-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNSVWDDARI EDRTVDKPVG SSHAQEKLAL VKSTLFKLDQ EDRPECDSWV
60 70 80 90 100
QLVKLICDED REEEFTTFKE LLREVKNVND KSVTGVALIH YIIVFDRADY
110 120 130 140 150
IELLHDNPSG AKLDLNLVDD IVGYTPLMWS FSLQRRNCCL ELFNAFDEIN
160 170 180 190 200
FNMTNKAGLT AWDMVPPYSP LSEFLEQNNM FRYRTEVKHE IPQISQPKDT
210 220 230 240 250
SLLMSNEDST TKETFDNIDL QVAGLTLSPG ANDNMFLDSD EKNMNHSQGA
260 270 280 290 300
ATLIDPTYTE DYHGTFDYDK LSPDQYLEFS DFDIPQILNL LISLPQKEPH
310 320 330 340 350
MTTYPAGLIY QCIRYADHKI KSKPLVESLI NLSLTKILTS VSSNGAAGLV
360 370 380 390 400
STEASLQAGD IVLQSYWLSC LSFLYYYLCR DDSFFKRHPS VLQELINTIH
410 420 430 440 450
SIIIELTSSI HCRLISLIDS TLLAYTTIQD VKQTLYKRDW NFFKKRKQAK
460 470 480 490 500
LLLKEKNRKQ LKEQQKKELH RKSQGQENHE EEEGQQDGND SDDRASTNDD
510 520 530 540 550
NNSSVSLFYD KEILRHLYPP SFEEQMKPSP LKIVQIFGAL SYVLNLHQTH
560 570 580 590 600
PIFQQQCLSI SVNWFATTLF NKILKDKKKR SLSRAHAIQI RLNLSTLESW
610 620 630 640 650
IQNNDFCVPK PMLIDDFMWQ RFPMTLIRDV GEIDLSDPIL RNVATYKPID
660 670 680 690 700
ENNKDLIYDT SNSLFYYQPF HKIAQIHLEP VFQLLQWLQV ATTLDSEESL
710 720 730 740 750
ISTMNLLPRI TPVQLLKSME KYNYELNENK FNSKLKKFLN NKIKDSKMSK
760 770 780 790 800
ADAYLQEHEI PYLVLPTIPE MTDLYSKGPD SHSFQPFLPG SIQDDVYEIH
810 820 830 840 850
DVNFKQRQNE PQISRTNSGT SDFTGDEDKA QYETEGVGES IDINETVEPE
860 870 880
SNAFNVGNDD YFKELNIPSS TAQRPAWSNN DDMEQNPW
Length:888
Mass (Da):102,579
Last modified:March 1, 2004 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i3F1634E5B2093DE9
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
U51033 Genomic DNA Translation: AAB68146.2
AY260887 Genomic DNA Translation: AAP21755.1
BK006949 Genomic DNA Translation: DAA11506.1

Protein sequence database of the Protein Information Resource

More...
PIRi
S70046

NCBI Reference Sequences

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RefSeqi
NP_015414.2, NM_001184186.1

Genome annotation databases

Ensembl fungal genome annotation project

More...
EnsemblFungii
YPR089W_mRNA; YPR089W; YPR089W

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
856204

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
sce:YPR089W

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U51033 Genomic DNA Translation: AAB68146.2
AY260887 Genomic DNA Translation: AAP21755.1
BK006949 Genomic DNA Translation: DAA11506.1
PIRiS70046
RefSeqiNP_015414.2, NM_001184186.1

3D structure databases

SMRiO13585
ModBaseiSearch...

Protein-protein interaction databases

BioGRIDi36259, 248 interactors
DIPiDIP-34618N
IntActiO13585, 14 interactors
STRINGi4932.YPR089W

PTM databases

iPTMnetiO13585

Proteomic databases

MaxQBiO13585
PaxDbiO13585
PRIDEiO13585

Genome annotation databases

EnsemblFungiiYPR089W_mRNA; YPR089W; YPR089W
GeneIDi856204
KEGGisce:YPR089W

Organism-specific databases

EuPathDBiFungiDB:YPR089W
SGDiS000006293 YPR089W

Phylogenomic databases

HOGENOMiCLU_019651_0_0_1
InParanoidiO13585
KOiK06867
OMAiLYAKDWN

Enzyme and pathway databases

BioCyciYEAST:G3O-34232-MONOMER

Miscellaneous databases

Protein Ontology

More...
PROi
PR:O13585
RNActiO13585 protein

Family and domain databases

CDDicd15473 Myo5p-like_CBD_DIL_ANK, 1 hit
Gene3Di1.25.40.20, 1 hit
InterProiView protein in InterPro
IPR036770 Ankyrin_rpt-contain_sf
IPR002710 Dilute_dom
IPR037986 Myo5p-like_CBD_DIL
PfamiView protein in Pfam
PF01843 DIL, 1 hit
SMARTiView protein in SMART
SM01132 DIL, 1 hit
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS51126 DILUTE, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiYP089_YEAST
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: O13585
Secondary accession number(s): D6W490, Q86ZS6
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2006
Last sequence update: March 1, 2004
Last modified: June 17, 2020
This is version 138 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteome

Documents

  1. Yeast
    Yeast (Saccharomyces cerevisiae): entries, gene names and cross-references to SGD
  2. Yeast chromosome XVI
    Yeast (Saccharomyces cerevisiae) chromosome XVI: entries and gene names
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