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Protein

Myc box-dependent-interacting protein 1

Gene

Bin1

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

May be involved in regulation of synaptic vesicle endocytosis. May act as a tumor suppressor and inhibits malignant cell transformation.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental protein
Biological processDifferentiation, Endocytosis

Enzyme and pathway databases

ReactomeiR-MMU-8856828 Clathrin-mediated endocytosis

Names & Taxonomyi

Protein namesi
Recommended name:
Myc box-dependent-interacting protein 1
Alternative name(s):
Amphiphysin II
Amphiphysin-like protein
Bridging integrator 1
SH3 domain-containing protein 9
Gene namesi
Name:Bin1
Synonyms:Amphl, Sh3p9
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 18

Organism-specific databases

MGIiMGI:108092 Bin1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cytoplasm, Nucleus

Pathology & Biotechi

Keywords - Diseasei

Tumor suppressor

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00001929522 – 588Myc box-dependent-interacting protein 1Add BLAST587

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1
Modified residuei296PhosphoserineCombined sources1
Modified residuei298PhosphoserineCombined sources1
Modified residuei304PhosphoserineCombined sources1
Modified residuei308PhosphothreonineCombined sources1
Modified residuei324PhosphoserineCombined sources1
Modified residuei332PhosphoserineCombined sources1

Post-translational modificationi

Phosphorylated by protein kinase C.By similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

MaxQBiO08539
PaxDbiO08539
PeptideAtlasiO08539
PRIDEiO08539

PTM databases

iPTMnetiO08539
PhosphoSitePlusiO08539

Miscellaneous databases

PMAP-CutDBiO08539

Expressioni

Tissue specificityi

Isoform 1 is expressed mainly in the brain. Isoform 2 is widely expressed.

Gene expression databases

BgeeiENSMUSG00000024381 Expressed in 305 organ(s), highest expression level in triceps surae
CleanExiMM_BIN1
ExpressionAtlasiO08539 baseline and differential
GenevisibleiO08539 MM

Interactioni

Subunit structurei

Heterodimer with AMPH (By similarity). Interacts (via SH3 domain) with SYNJ1. Interacts (via SH3 domain) with DNM1. Interacts with CLTC. Interacts with AP2A2. Interacts with AP2B1. Interacts with MYC (via N-terminal transactivation domain); the interaction requires the integrity of the conserved MYC box regions 1 and 2. Binds SH3GLB1. Interacts with BIN2 (By similarity).By similarity

Binary interactionsi

GO - Molecular functioni

Protein-protein interaction databases

BioGridi206025, 14 interactors
ComplexPortaliCPX-744 c-MYC-BIN1 complex
IntActiO08539, 14 interactors
MINTiO08539
STRINGi10090.ENSMUSP00000025239

Structurei

3D structure databases

ProteinModelPortaliO08539
SMRiO08539
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini29 – 276BARPROSITE-ProRule annotationAdd BLAST248
Domaini515 – 588SH3PROSITE-ProRule annotationAdd BLAST74

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni2 – 122Interaction with BIN2By similarityAdd BLAST121
Regioni379 – 422Clathrin-bindingBy similarityAdd BLAST44

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili15 – 42Sequence analysisAdd BLAST28
Coiled coili193 – 274Sequence analysisAdd BLAST82

Keywords - Domaini

Coiled coil, SH3 domain

Phylogenomic databases

eggNOGiENOG410ITR4 Eukaryota
ENOG410XQXT LUCA
GeneTreeiENSGT00390000017588
HOGENOMiHOG000252987
HOVERGENiHBG004224
InParanoidiO08539
KOiK12562
OrthoDBiEOG091G07IE
PhylomeDBiO08539
TreeFamiTF313542

Family and domain databases

CDDicd12139 SH3_Bin1, 1 hit
Gene3Di1.20.1270.60, 2 hits
InterProiView protein in InterPro
IPR027267 AH/BAR_dom_sf
IPR003005 Amphiphysin
IPR035471 Amphiphysin-2_SH3
IPR003023 Amphiphysin_2
IPR004148 BAR_dom
IPR036028 SH3-like_dom_sf
IPR001452 SH3_domain
PANTHERiPTHR45479 PTHR45479, 1 hit
PfamiView protein in Pfam
PF03114 BAR, 1 hit
PF14604 SH3_9, 1 hit
PRINTSiPR01251 AMPHIPHYSIN
PR01253 AMPHIPHYSIN2
PR00452 SH3DOMAIN
SMARTiView protein in SMART
SM00721 BAR, 1 hit
SM00326 SH3, 1 hit
SUPFAMiSSF103657 SSF103657, 1 hit
SSF50044 SSF50044, 1 hit
PROSITEiView protein in PROSITE
PS51021 BAR, 1 hit
PS50002 SH3, 1 hit

Sequences (2+)i

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

This entry has 2 described isoforms and 1 potential isoform that is computationally mapped.Show allAlign All

Isoform 1 (identifier: O08539-1) [UniParc]FASTAAdd to basket
Also known as: BRAMP2

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide
        10         20         30         40         50
MAEMGSKGVT AGKIASNVQK KLTRAQEKVL QKLGKADETK DEQFEQCVQN
60 70 80 90 100
FNKQLTEGTR LQKDLRTYLA SVKAMHEASK KLSECLQEVY EPEWPGRDEA
110 120 130 140 150
NKIAENNDLL WMDYHQKLVD QALLTMDTYL GQFPDIKSRI AKRGRKLVDY
160 170 180 190 200
DSARHHYESL QTAKKKDEAK IAKPVSLLEK AAPQWCQGKL QAHLVAQTNL
210 220 230 240 250
LRNQAEEELI KAQKVFEEMN VDLQEELPSL WNSRVGFYVN TFQSIAGLEE
260 270 280 290 300
NFHKEMSKLN QNLNDVLVSL EKQHGSNTFT VKAQPSDNAP EKGNKSPSPP
310 320 330 340 350
PDGSPAATPE IRVNHEPEPA SGASPGATIP KSPSQLRKGP PVPPPPKHTP
360 370 380 390 400
SKEMKQEQIL SLFDDAFVPE ISVTTPSQFE APGPFSEQAS LLDLDFEPLP
410 420 430 440 450
PVASPVKAPT PSGQSIPWDL WEPTESQAGI LPSGEPSSAE GSFAVAWPSQ
460 470 480 490 500
TAEPGPAQPA EASEVVGGAQ EPGETAASEA TSSSLPAVVV ETFSATVNGA
510 520 530 540 550
VEGSAGTGRL DLPPGFMFKV QAQHDYTATD TDELQLKAGD VVLVIPFQNP
560 570 580
EEQDEGWLMG VKESDWNQHK ELEKCRGVFP ENFTERVQ
Length:588
Mass (Da):64,470
Last modified:July 1, 1997 - v1
Checksum:i63CA362461500F38
GO
Isoform 2 (identifier: O08539-2) [UniParc]FASTAAdd to basket
Also known as: SH3P9

The sequence of this isoform differs from the canonical sequence as follows:
     174-204: Missing.
     335-457: Missing.

Show »
Length:434
Mass (Da):48,014
Checksum:iB0E861C793BB143A
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q6P1B9Q6P1B9_MOUSE
Bin1 protein
Bin1
477Annotation score:

Alternative sequence

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Alternative sequenceiVSP_000254174 – 204Missing in isoform 2. 1 PublicationAdd BLAST31
Alternative sequenceiVSP_000255335 – 457Missing in isoform 2. 1 PublicationAdd BLAST123

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U86405 mRNA Translation: AAC53318.1
U60884 mRNA Translation: AAC52661.1
CCDSiCCDS29119.1 [O08539-1]
RefSeqiNP_033798.1, NM_009668.2 [O08539-1]
XP_006526056.1, XM_006525993.3 [O08539-2]
UniGeneiMm.4383

Genome annotation databases

EnsembliENSMUST00000025239; ENSMUSP00000025239; ENSMUSG00000024381 [O08539-1]
GeneIDi30948
KEGGimmu:30948
UCSCiuc008ejh.1 mouse [O08539-1]
uc008ejj.1 mouse [O08539-2]

Keywords - Coding sequence diversityi

Alternative splicing

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U86405 mRNA Translation: AAC53318.1
U60884 mRNA Translation: AAC52661.1
CCDSiCCDS29119.1 [O08539-1]
RefSeqiNP_033798.1, NM_009668.2 [O08539-1]
XP_006526056.1, XM_006525993.3 [O08539-2]
UniGeneiMm.4383

3D structure databases

ProteinModelPortaliO08539
SMRiO08539
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi206025, 14 interactors
ComplexPortaliCPX-744 c-MYC-BIN1 complex
IntActiO08539, 14 interactors
MINTiO08539
STRINGi10090.ENSMUSP00000025239

PTM databases

iPTMnetiO08539
PhosphoSitePlusiO08539

Proteomic databases

MaxQBiO08539
PaxDbiO08539
PeptideAtlasiO08539
PRIDEiO08539

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000025239; ENSMUSP00000025239; ENSMUSG00000024381 [O08539-1]
GeneIDi30948
KEGGimmu:30948
UCSCiuc008ejh.1 mouse [O08539-1]
uc008ejj.1 mouse [O08539-2]

Organism-specific databases

CTDi274
MGIiMGI:108092 Bin1

Phylogenomic databases

eggNOGiENOG410ITR4 Eukaryota
ENOG410XQXT LUCA
GeneTreeiENSGT00390000017588
HOGENOMiHOG000252987
HOVERGENiHBG004224
InParanoidiO08539
KOiK12562
OrthoDBiEOG091G07IE
PhylomeDBiO08539
TreeFamiTF313542

Enzyme and pathway databases

ReactomeiR-MMU-8856828 Clathrin-mediated endocytosis

Miscellaneous databases

ChiTaRSiBin1 mouse
PMAP-CutDBiO08539
PROiPR:O08539
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000024381 Expressed in 305 organ(s), highest expression level in triceps surae
CleanExiMM_BIN1
ExpressionAtlasiO08539 baseline and differential
GenevisibleiO08539 MM

Family and domain databases

CDDicd12139 SH3_Bin1, 1 hit
Gene3Di1.20.1270.60, 2 hits
InterProiView protein in InterPro
IPR027267 AH/BAR_dom_sf
IPR003005 Amphiphysin
IPR035471 Amphiphysin-2_SH3
IPR003023 Amphiphysin_2
IPR004148 BAR_dom
IPR036028 SH3-like_dom_sf
IPR001452 SH3_domain
PANTHERiPTHR45479 PTHR45479, 1 hit
PfamiView protein in Pfam
PF03114 BAR, 1 hit
PF14604 SH3_9, 1 hit
PRINTSiPR01251 AMPHIPHYSIN
PR01253 AMPHIPHYSIN2
PR00452 SH3DOMAIN
SMARTiView protein in SMART
SM00721 BAR, 1 hit
SM00326 SH3, 1 hit
SUPFAMiSSF103657 SSF103657, 1 hit
SSF50044 SSF50044, 1 hit
PROSITEiView protein in PROSITE
PS51021 BAR, 1 hit
PS50002 SH3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiBIN1_MOUSE
AccessioniPrimary (citable) accession number: O08539
Secondary accession number(s): Q62434
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 11, 2001
Last sequence update: July 1, 1997
Last modified: November 7, 2018
This is version 179 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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