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Protein

50S ribosomal protein L18

Gene

rpl18

Organism
Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L18UniRule annotation
Gene namesi
Name:rpl18UniRule annotation
Ordered Locus Names:Saci_0578
OrganismiSulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
Taxonomic identifieri330779 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000001018 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001314171 – 19750S ribosomal protein L18Add BLAST197

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts the 5S and 23S rRNAs.UniRule annotation

Protein-protein interaction databases

STRINGi330779.Saci_0578

Structurei

3D structure databases

ProteinModelPortaliO05640
SMRiO05640
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL18 family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04088 Archaea
COG0256 LUCA
HOGENOMiHOG000105947
KOiK02881
OMAiMAHGPRY
OrthoDBiPOG093Z0CXG

Family and domain databases

HAMAPiMF_01337_A Ribosomal_L18_A, 1 hit
InterProiView protein in InterPro
IPR005485 Rbsml_L5_euk/L18_arc
IPR025607 Rbsml_L5e/L18P_C
PANTHERiPTHR23410 PTHR23410, 2 hits
PfamiView protein in Pfam
PF14204 Ribosomal_L18_c, 1 hit
PF17144 Ribosomal_L5e, 1 hit

Sequencei

Sequence statusi: Complete.

O05640-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTQGPNYRIK FRRRREGKTD YYTRYTYVIN NAIRFVPRLT NKYVIVSVSK
60 70 80 90 100
FDQKGDIMIA YAHSIELVKK YGWKGDTNNT PAAYLTGYLA GLRAVKSGVK
110 120 130 140 150
AAVSDIGLFV PVKGGRIFAV IKGAIDAGLK VPVGDLGKLK DRVNGSHISA
160 170 180 190
YAQKLKNENQ ELYNKLFSSY IQRGLDPVLL PQHFEEVLNK IKENGGK
Length:197
Mass (Da):22,105
Last modified:July 1, 1997 - v1
Checksum:i3908018D5FBF2571
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Y07778 Genomic DNA Translation: CAA69096.1
CP000077 Genomic DNA Translation: AAY79970.1
RefSeqiWP_011277472.1, NC_007181.1

Genome annotation databases

EnsemblBacteriaiAAY79970; AAY79970; Saci_0578
GeneIDi3473216
KEGGisai:Saci_0578
PATRICifig|330779.12.peg.557

Similar proteinsi

Entry informationi

Entry nameiRL18_SULAC
AccessioniPrimary (citable) accession number: O05640
Secondary accession number(s): Q4JB59
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: July 1, 1997
Last modified: March 28, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

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