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Protein

Ent-copalyl diphosphate synthase, chloroplastic

Gene
N/A
Organism
Pisum sativum (Garden pea)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalyzes the conversion of geranylgeranyl diphosphate to the gibberellin precursor ent-copalyl diphosphate.

Catalytic activityi

Geranylgeranyl diphosphate = ent-copalyl diphosphate.

Cofactori

Mg2+Curated

Pathwayi: gibberellin biosynthesis

This protein is involved in the pathway gibberellin biosynthesis, which is part of Plant hormone biosynthesis.
View all proteins of this organism that are known to be involved in the pathway gibberellin biosynthesis and in Plant hormone biosynthesis.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomerase
LigandMagnesium, Metal-binding

Enzyme and pathway databases

UniPathwayi
UPA00390

Names & Taxonomyi

Protein namesi
Recommended name:
Ent-copalyl diphosphate synthase, chloroplastic (EC:5.5.1.13)
Short name:
Ent-CDP synthase
Alternative name(s):
Ent-copalyl diphosphate synthase
Ent-kaurene synthase A
Short name:
KSA
OrganismiPisum sativum (Garden pea)
Taxonomic identifieri3888 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideae50 kb inversion cladeNPAAA cladeHologaleginaIRL cladeFabeaePisum

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_0000033624? – 801Ent-copalyl diphosphate synthase, chloroplastic
Transit peptidei1 – ?ChloroplastSequence analysis

Proteomic databases

PRIDEiO04408

Structurei

3D structure databases

ProteinModelPortaliO04408
SMRiO04408
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi373 – 376DXDD motif4

Domaini

The Asp-Xaa-Asp-Asp (DXDD) motif is important for the catalytic activity, presumably through binding to Mg2+.

Sequence similaritiesi

Belongs to the terpene synthase family.Curated

Keywords - Domaini

Transit peptide

Family and domain databases

Gene3Di1.10.600.10, 1 hit
1.50.10.130, 1 hit
InterProiView protein in InterPro
IPR008949 Isoprenoid_synthase_dom_sf
IPR001906 Terpene_synth_N
IPR036965 Terpene_synth_N_sf
IPR005630 Terpene_synthase_metal-bd
IPR008930 Terpenoid_cyclase/PrenylTrfase
PfamiView protein in Pfam
PF01397 Terpene_synth, 1 hit
PF03936 Terpene_synth_C, 1 hit
SUPFAMiSSF48239 SSF48239, 2 hits
SSF48576 SSF48576, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

O04408-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFTHFSTHFH LPSSSSLFFL HPFYKSSSLG AVSFVAKDKE KRCRAISKSR
60 70 80 90 100
TQEYEGVFQT NVATLKLSEI NVEDVIVIDD EEEQDIRVGL VNKIKSILSS
110 120 130 140 150
LEDGEITISA YDTAWVALVE DVNAISTPQF PSSLEWIAKN QLQDGSWGDS
160 170 180 190 200
RLFSAHDRII NTLACVIALR SWNMHSEKCD KGMIFFRENL SKLENENEEH
210 220 230 240 250
MPIGFEVAFP SLLEGARGIK PLMCPNDSPI LKNIFEKRDE KLTRIPKEIM
260 270 280 290 300
HKVPTTLLHS LEGMSGLDWK QLLKLQSQDG SFLFSPSSTA FALMQTKDGN
310 320 330 340 350
CLKYLNNVVK KFNGGVPNVY PVDLFEHIWV VDRLERLGIS RFFRHEIKDC
360 370 380 390 400
MNYVSKIWSE KGICWARNSN VQDIDDTAMA FRLLRLHGHQ VSAHVFKHFE
410 420 430 440 450
RNGEFFCFAG QCTQAVTGMY NLFRASQVLF PGEKILEHAK HFSAKVLKEK
460 470 480 490 500
REANELIDKW IIMKNLPEEV GYALDMPWYA NLDRIETRFY IDQYGAESDV
510 520 530 540 550
WIGKTLYRMA YVNNNNYLEL AKLDYNNCQA QHLIEWNVIQ TWYLESRLGE
560 570 580 590 600
FGLSKRDLLL AYFLATGSIF EPERSHERLA WAKTTALLET IKCYVRNEDL
610 620 630 640 650
RKDFAKKFND HIDVRDYSIA RRMKRNKTEH ELVESLFATI GEISWDVRLS
660 670 680 690 700
YGHEIGYDMH QCWKKWLSSW QSEGDKCEGE AELLIQIINL CSNHWISEGP
710 720 730 740 750
SMQSTIQHLL QLTNSICHKL SCYQKDKELK GISCQENITN SEVESKMQEL
760 770 780 790 800
VQMVFQKCPN DIDFNVKNTF FTIAKSFYYA AFCDSRTINF HIAKVLFEKV

V
Length:801
Mass (Da):92,718
Last modified:July 1, 1997 - v1
Checksum:i5CB88ADE00366844
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U63652 mRNA Translation: AAB58822.1
PIRiT06783

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U63652 mRNA Translation: AAB58822.1
PIRiT06783

3D structure databases

ProteinModelPortaliO04408
SMRiO04408
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiO04408

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayi
UPA00390

Family and domain databases

Gene3Di1.10.600.10, 1 hit
1.50.10.130, 1 hit
InterProiView protein in InterPro
IPR008949 Isoprenoid_synthase_dom_sf
IPR001906 Terpene_synth_N
IPR036965 Terpene_synth_N_sf
IPR005630 Terpene_synthase_metal-bd
IPR008930 Terpenoid_cyclase/PrenylTrfase
PfamiView protein in Pfam
PF01397 Terpene_synth, 1 hit
PF03936 Terpene_synth_C, 1 hit
SUPFAMiSSF48239 SSF48239, 2 hits
SSF48576 SSF48576, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiKSA_PEA
AccessioniPrimary (citable) accession number: O04408
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: July 1, 1997
Last modified: November 7, 2018
This is version 86 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
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