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Protein

60S ribosomal protein L19

Gene

rpl-19

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

  • determination of adult lifespan Source: WormBase
  • translation Source: GO_Central

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L19
Gene namesi
Name:rpl-19
ORF Names:C09D4.5
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiC09D4.5 ; CE08034 ; WBGene00004431 ; rpl-19

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001311761 – 19860S ribosomal protein L19Add BLAST198

Proteomic databases

EPDiO02639
PaxDbiO02639
PeptideAtlasiO02639
PRIDEiO02639

PTM databases

iPTMnetiO02639

Expressioni

Gene expression databases

BgeeiWBGene00004431

Interactioni

Protein-protein interaction databases

BioGridi37659, 5 interactors
DIPiDIP-25603N
IntActiO02639, 6 interactors
STRINGi6239.C09D4.5.1

Structurei

3D structure databases

ProteinModelPortaliO02639
SMRiO02639
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1696 Eukaryota
COG2147 LUCA
GeneTreeiENSGT00390000012628
HOGENOMiHOG000231277
InParanoidiO02639
KOiK02885
OMAiNRVWIDP
OrthoDBiEOG091G0MKY
PhylomeDBiO02639

Family and domain databases

CDDicd01417 Ribosomal_L19e_E, 1 hit
Gene3Di1.10.1650.10, 1 hit
HAMAPiMF_01475 Ribosomal_L19e, 1 hit
InterProiView protein in InterPro
IPR035970 60S_ribosomal_L19/L19e_sf
IPR000196 Ribosomal_L19/L19e
IPR023638 Ribosomal_L19/L19e_CS
IPR015972 Ribosomal_L19/L19e_dom1
IPR033935 Ribosomal_L19_euka
PfamiView protein in Pfam
PF01280 Ribosomal_L19e, 1 hit
SMARTiView protein in SMART
SM01416 Ribosomal_L19e, 1 hit
SUPFAMiSSF48140 SSF48140, 1 hit
PROSITEiView protein in PROSITE
PS00526 RIBOSOMAL_L19E, 1 hit

Sequencei

Sequence statusi: Complete.

O02639-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNLRLQKRL ASAVLKCGKH RVWLDPNEVS EISGANSRQS IRRLVNDGLI
60 70 80 90 100
IRKPVTVHSR FRAREYEEAR RKGRHTGYGK RRGTANARMP EKTLWIRRMR
110 120 130 140 150
VLRNLLRRYR DAKKLDKHLY HELYLRAKGN NFKNKKNLIE YIFKKKTENK
160 170 180 190
RAKQLADQAQ ARRDKNKESR KRREERQVVK RAELLRKISQ SEKVIAGK
Length:198
Mass (Da):23,652
Last modified:July 1, 1997 - v1
Checksum:i03876B70136D0479
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FO080461 Genomic DNA Translation: CCD63892.1
PIRiT29135
RefSeqiNP_491608.1, NM_059207.5
UniGeneiCel.6672

Genome annotation databases

EnsemblMetazoaiC09D4.5.1; C09D4.5.1; WBGene00004431
C09D4.5.2; C09D4.5.2; WBGene00004431
C09D4.5.3; C09D4.5.3; WBGene00004431
C09D4.5.4; C09D4.5.4; WBGene00004431
GeneIDi172201
KEGGicel:CELE_C09D4.5
UCSCiC09D4.5.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRL19_CAEEL
AccessioniPrimary (citable) accession number: O02639
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: July 1, 1997
Last modified: July 18, 2018
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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