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Protein
Submitted name:

Lipid Binding Protein

Gene

lbp-8

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  • lipid binding Source: WormBase

GO - Biological processi

  • lipid transport Source: WormBase

Keywordsi

Biological processTransportUniRule annotation

Enzyme and pathway databases

ReactomeiR-CEL-163560 Triglyceride catabolism
R-CEL-2453902 The canonical retinoid cycle in rods (twilight vision)
R-CEL-5362517 Signaling by Retinoic Acid
R-CEL-5365859 RA biosynthesis pathway
R-CEL-6798695 Neutrophil degranulation
R-CEL-975634 Retinoid metabolism and transport

Names & Taxonomyi

Protein namesi
Submitted name:
Lipid Binding ProteinImported
Gene namesi
Name:lbp-8Imported
ORF Names:CELE_T22G5.6Imported, T22G5.6Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome V

Organism-specific databases

WormBaseiT22G5.6 ; CE41159 ; WBGene00002260 ; lbp-8

PTM / Processingi

Proteomic databases

PaxDbiO02324
PeptideAtlasiO02324

Expressioni

Gene expression databases

BgeeiWBGene00002260

Interactioni

Protein-protein interaction databases

STRINGi6239.T22G5.6

Structurei

3D structure databases

ProteinModelPortaliO02324
SMRiO02324
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 26FABPInterPro annotationAdd BLAST18

Sequence similaritiesi

Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG4015 Eukaryota
ENOG4111US8 LUCA
GeneTreeiENSGT00760000118898
HOGENOMiHOG000004829
InParanoidiO02324
KOiK08752
OMAiICRREFV
OrthoDBiEOG091G0QSV
PhylomeDBiO02324

Family and domain databases

Gene3Di2.40.128.20, 1 hit
InterProiView protein in InterPro
IPR012674 Calycin
IPR000463 Fatty_acid-bd
IPR031259 ILBP
IPR000566 Lipocln_cytosolic_FA-bd_dom
PANTHERiPTHR11955 PTHR11955, 1 hit
PfamiView protein in Pfam
PF00061 Lipocalin, 1 hit
PRINTSiPR00178 FATTYACIDBP
SUPFAMiSSF50814 SSF50814, 1 hit
PROSITEiView protein in PROSITE
PS00214 FABP, 1 hit

Sequencei

Sequence statusi: Complete.

O02324-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSMKEFIGR WKLVHSENFE EYLKEIGVGL LIRKAASLTS PTLEIKLDGD
60 70 80 90 100
TWHFNQYSTF KNNKLAFKIR EKFVEIAPDE RSYNTLVTFE NGKFISHQDK
110 120 130
IKENHHSSVF TTWLENGKLL QTYQSGSVIC RREFVKE
Length:137
Mass (Da):16,092
Last modified:July 10, 2007 - v2
Checksum:iEFF96E41019F5551
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284605 Genomic DNA Translation: CAB03391.2
PIRiT25127
RefSeqiNP_506444.2, NM_074043.4
UniGeneiCel.27782

Genome annotation databases

EnsemblMetazoaiT22G5.6; T22G5.6; WBGene00002260
GeneIDi188761
KEGGicel:CELE_T22G5.6
UCSCiT22G5.6 c. elegans

Similar proteinsi

Entry informationi

Entry nameiO02324_CAEEL
AccessioniPrimary (citable) accession number: O02324
Entry historyiIntegrated into UniProtKB/TrEMBL: July 1, 1997
Last sequence update: July 10, 2007
Last modified: March 28, 2018
This is version 130 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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