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Protein
Submitted name:

Transcription factor GAMYB

Gene

TRIUR3_15006

Organism
Triticum urartu (Red wild einkorn) (Crithodium urartu)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Transcription factor GAMYBImported
Gene namesi
ORF Names:TRIUR3_15006Imported
OrganismiTriticum urartu (Red wild einkorn) (Crithodium urartu)Imported
Taxonomic identifieri4572 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeTriticinaeTriticum
Proteomesi
  • UP000015106 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini61 – 113HTH myb-typeInterPro annotationAdd BLAST53
Domaini114 – 168HTH myb-typeInterPro annotationAdd BLAST55

Phylogenomic databases

OMAiSTNLLCP
OrthoDBiEOG09360A27

Family and domain databases

CDDicd00167 SANT, 2 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR015495 Myb-like_TF
IPR017930 Myb_dom
IPR001005 SANT/Myb
PANTHERiPTHR10641 PTHR10641, 1 hit
SMARTiView protein in SMART
SM00717 SANT, 2 hits
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51294 HTH_MYB, 2 hits

Sequencei

Sequence statusi: Complete.

M7YZU0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEGKDATLAL PELLKEEVQS PPLSPLSPRS SDDDETEADD SDGEEEEGGA
60 70 80 90 100
PVGTSGAVVS GPPMKKGPWT SDEDQRLRTY VEAHGEGNWN QVQRNAGLNR
110 120 130 140 150
CGKSCRLRWA NHLRPNLKKG PFSKEEEQKI IELHALHGNK WAKMASVLEG
160 170 180 190 200
RTDNEIKNFW NTRTKRLQKA GLGLYPDGLL SRLANQEMGS HSPDDSRGKK
210 220 230 240 250
RQNELSQGNG LEFDDIIFEK LDYKKQSDNF LTPNFTIQDS LPMNDINYPL
260 270 280 290 300
KRHASSGIVS DYGGSPKCGQ FSNEIEEASY NDLNSEMSIV SFNNVISNSI
310 320 330 340 350
QLLDDNFPIS GKILPIKMEL PSFQYVAYDT STNLLCPSST LPEQVHGFGV
360 370 380 390 400
PTQFEGEFDS ELSFPYGYHF IPSSSIFDDN TLEYSSFNEL RTYKSPTDLD
410 420 430 440 450
AIFMDNKHNA DILHDKYFCS DPCATDVSAE ARFLNEDSTH SEYQPNNGPL
460 470 480
NALLYGNFCN DVTLSVRDDG HQTLLSSNGV PNTHHLPGY
Length:489
Mass (Da):54,525
Last modified:May 29, 2013 - v1
Checksum:i90604055809DBF1D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KD284974 Genomic DNA Translation: EMS45560.1

Genome annotation databases

EnsemblPlantsiTRIUR3_15006-T1; TRIUR3_15006-P1; TRIUR3_15006
GrameneiTRIUR3_15006-T1; TRIUR3_15006-P1; TRIUR3_15006

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KD284974 Genomic DNA Translation: EMS45560.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiTRIUR3_15006-T1; TRIUR3_15006-P1; TRIUR3_15006
GrameneiTRIUR3_15006-T1; TRIUR3_15006-P1; TRIUR3_15006

Phylogenomic databases

OMAiSTNLLCP
OrthoDBiEOG09360A27

Family and domain databases

CDDicd00167 SANT, 2 hits
InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR015495 Myb-like_TF
IPR017930 Myb_dom
IPR001005 SANT/Myb
PANTHERiPTHR10641 PTHR10641, 1 hit
SMARTiView protein in SMART
SM00717 SANT, 2 hits
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51294 HTH_MYB, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiM7YZU0_TRIUA
AccessioniPrimary (citable) accession number: M7YZU0
Entry historyiIntegrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: November 7, 2018
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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