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Protein

DNA ligase

Gene

BcDW1_972

Organism
Botryotinia fuckeliana (strain BcDW1) (Noble rot fungus) (Botrytis cinerea)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotationImported
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:BcDW1_972Imported
OrganismiBotryotinia fuckeliana (strain BcDW1) (Noble rot fungus) (Botrytis cinerea)Imported
Taxonomic identifieri1290391 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaLeotiomycetesHelotialesSclerotiniaceaeBotrytis
Proteomesi
  • UP000012045 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini648 – 785DNA_LIGASE_A3InterPro annotationAdd BLAST138

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili100 – 120Sequence analysisAdd BLAST21

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

OrthoDBiEOG092C0FHN

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 2 hits
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

M7U9M3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPPKQATLGK FFGQPKGAPA KQSKLSFSSK PSSSKPPASS PSASEASEEN
60 70 80 90 100
KDVEMKDGDS DIGNEDSIKK EDGSDKKQKV KKENAKLEKG VKRSRSASPK
110 120 130 140 150
LSAKTKAIKI EDEVKEEEEE EDEDEEPIVK KPRRAGKAET REKKPSPKPV
160 170 180 190 200
SMKTQTKPEP ESSTKKATSK NMSPPPKRGK NAKVVEEDEE DEDEVQATAP
210 220 230 240 250
SKPAKRRDSN VSKSASESEI EEDLESSGDE KPEVAAKARE KIQTTLKSKS
260 270 280 290 300
KDPYPDWKPG EPVPYAALCT TFSLVEMTTK RLVIAAHCSL FLRQVLRLTP
310 320 330 340 350
DDLLPTVLLM INKLAADYAG IELGIGESLI MKAIGESTGR NLSVIKNDQK
360 370 380 390 400
EIGDLGLVAV KSRSNQPVMF KPKPLTIRGV LKSLIDIATM QGNGAQGRKV
410 420 430 440 450
DGIKKLLSAA DAHSSGKVDI TKDKGGASEA KYIVRFLEGK LRLGLAEKTV
460 470 480 490 500
LVSLAQAMVC HEIEAKGSGK VPSTEQMAKG ESILKAVHSS LPSYDVIIPA
510 520 530 540 550
MLEHGIFNLK DNCKLQPGVP LKPMLAKPTK AITEVLDRFE NQTFTCEYKY
560 570 580 590 600
DGERAQIHYV SKDSSKQYLG ATPAAAKSSD GGLAAIFSRN SEDLSKKYPD
610 620 630 640 650
ILGKLNTWVK EDTKSFVLDC ETVAWDTVEK KVLPFQQLMT RKKKDVKVED
660 670 680 690 700
VKVKVCVFAF DLLFLNGEAV VEKSLRERRA LLHEAFQPVE GEFQFATSMN
710 720 730 740 750
GQEIDEIQTF LDDSVKASCE GLMVKMLDGT ESGYEPSKRS RNWLKIKKDY
760 770 780 790 800
LSGIGDSLDL VVLGAYYGRG KRTSVYGAFL LACHNPQTDT YETICNIGTG
810 820 830 840 850
FSEQVLEELY AQLSAIVIDR PKPFYSHSSG NQHQPDVWFE PRYVWEVKTA
860 870 880 890 900
DLTLSPRYKA GCKEGVDKGG ERGISLRFPR FIKIRDDKKP DMATSSRQVA
910 920
EMYRKQESVT KNKGPSVDDD FEY
Length:923
Mass (Da):101,964
Last modified:May 29, 2013 - v1
Checksum:iF9D23C70E0B4492D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB707706 Genomic DNA Translation: EMR90355.1

Genome annotation databases

EnsemblFungiiEMR90355; EMR90355; BcDW1_972

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB707706 Genomic DNA Translation: EMR90355.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiEMR90355; EMR90355; BcDW1_972

Phylogenomic databases

OrthoDBiEOG092C0FHN

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 2 hits
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiM7U9M3_BOTF1
AccessioniPrimary (citable) accession number: M7U9M3
Entry historyiIntegrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: December 20, 2017
This is version 19 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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