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Protein
Submitted name:

U11/U12 small nuclear ribonucleoprotein 35 kDa protein

Gene

UY3_05610

Organism
Chelonia mydas (Green sea-turtle) (Chelonia agassizi)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRibonucleoproteinImported, RNA-bindingPROSITE-ProRule annotation, Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
U11/U12 small nuclear ribonucleoprotein 35 kDa proteinImported
Gene namesi
ORF Names:UY3_05610Imported
OrganismiChelonia mydas (Green sea-turtle) (Chelonia agassizi)Imported
Taxonomic identifieri8469 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaTestudinesCryptodiraDurocryptodiraAmerichelydiaChelonioideaCheloniidaeChelonia
Proteomesi
  • UP000031443 Componenti: Unassembled WGS sequence

Subcellular locationi

    Keywords - Cellular componenti

    Virion

    Structurei

    3D structure databases

    ProteinModelPortaliM7BIQ7
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Domaini51 – 129RRMInterPro annotationAdd BLAST79

    Phylogenomic databases

    KOiK13155

    Family and domain databases

    CDDicd12237 RRM_snRNP35, 1 hit
    Gene3Di3.30.70.330, 1 hit
    InterProiView protein in InterPro
    IPR012677 Nucleotide-bd_a/b_plait_sf
    IPR035979 RBD_domain_sf
    IPR000504 RRM_dom
    IPR034146 snRNP35_RRM
    PfamiView protein in Pfam
    PF00076 RRM_1, 1 hit
    SMARTiView protein in SMART
    SM00360 RRM, 1 hit
    SUPFAMiSSF54928 SSF54928, 1 hit
    PROSITEiView protein in PROSITE
    PS50102 RRM, 1 hit

    Sequencei

    Sequence statusi: Complete.

    M7BIQ7-1 [UniParc]FASTAAdd to basket
    « Hide
            10         20         30         40         50
    MNEWAPIAKE YDPLKAGSID GTDEEPHDRA IWRAMLARYV PNKGVTGDPH
    60 70 80 90 100
    LTLFVARLNL QTTEEKLKEA FSRYGDIRKI RLVRDLVTGF SKGYAFIEYK
    110 120 130 140 150
    EERALLKAHR DANRLVIDQH EIFVDFELER TLKGWIPRRL GGGFGGKKES
    160 170 180 190 200
    GQLRFGGRDR PFRKPINLPT MKSDFYGEGP VEKRERSWSR EGARDWRTRD
    210 220 230 240 250
    RDLERNRDKR WLERERSWAW GESNRERERD SKEERSRGRE RKDRERKDRE
    260
    RDRSRERDPK KQRDDDKHR
    Length:269
    Mass (Da):32,280
    Last modified:May 29, 2013 - v1
    Checksum:i375C15DD4B3C626B
    GO

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    KB523138 Genomic DNA Translation: EMP37079.1
    RefSeqiXP_007058331.1, XM_007058269.1

    Genome annotation databases

    GeneIDi102947968
    KEGGicmy:102947968

    Similar proteinsi

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    KB523138 Genomic DNA Translation: EMP37079.1
    RefSeqiXP_007058331.1, XM_007058269.1

    3D structure databases

    ProteinModelPortaliM7BIQ7
    ModBaseiSearch...
    MobiDBiSearch...

    Protocols and materials databases

    Structural Biology KnowledgebaseSearch...

    Genome annotation databases

    GeneIDi102947968
    KEGGicmy:102947968

    Organism-specific databases

    CTDi11066

    Phylogenomic databases

    KOiK13155

    Family and domain databases

    CDDicd12237 RRM_snRNP35, 1 hit
    Gene3Di3.30.70.330, 1 hit
    InterProiView protein in InterPro
    IPR012677 Nucleotide-bd_a/b_plait_sf
    IPR035979 RBD_domain_sf
    IPR000504 RRM_dom
    IPR034146 snRNP35_RRM
    PfamiView protein in Pfam
    PF00076 RRM_1, 1 hit
    SMARTiView protein in SMART
    SM00360 RRM, 1 hit
    SUPFAMiSSF54928 SSF54928, 1 hit
    PROSITEiView protein in PROSITE
    PS50102 RRM, 1 hit
    ProtoNetiSearch...

    Entry informationi

    Entry nameiM7BIQ7_CHEMY
    AccessioniPrimary (citable) accession number: M7BIQ7
    Entry historyiIntegrated into UniProtKB/TrEMBL: May 29, 2013
    Last sequence update: May 29, 2013
    Last modified: May 23, 2018
    This is version 29 of the entry and version 1 of the sequence. See complete history.
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported
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    Main funding by: National Institutes of Health

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