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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

RESH_01886

Organism
Rhodopirellula europaea SH398
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:RESH_01886Imported
OrganismiRhodopirellula europaea SH398Imported
Taxonomic identifieri1263868 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaeRhodopirellula
Proteomesi
  • UP000011996 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini326 – 456DNA_LIGASE_A3InterPro annotationAdd BLAST131

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

M5SMK8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLFAELFQR LDQTTKTNEK VAAIAQYMSA ASPEDAAWAI ASLSGRRVKR
60 70 80 90 100
LVSTGLLRRL AAESAGIPDW LFEESYDSVG DLAETISLLV PAGNSSDADS
110 120 130 140 150
RSLSDWMQND VLPLARMDES EQSDAVRQMW AQTEGTSRLI LMKLITGSFR
160 170 180 190 200
VGVSSRLVAR GIAESNGLPA DVIAHRLMGD WDPTPEFIER LHSTDLNDAT
210 220 230 240 250
HSRPYPFCLA HALADDANAD GDGPDWQTLG DPSEYQAEWK WDGIRGQVIR
260 270 280 290 300
RAGRTYIWSR GEDLMVNRWP EIERAAELLP DGTVIDGEIL ASRLISPASD
310 320 330 340 350
DSEQAIEVLP FAQLQRRIGR KTVGKKLLAE VPVMFHAFDC LELDGNDLRA
360 370 380 390 400
KPLADRRDAL LKMLSIHQPP SVVWNEPLSF ESWDDLAAIR STSRDVLAEG
410 420 430 440 450
VMIKRLDAPY SVGRVRGVWW KWKLAPHTVD AVLIYAQRGH GKRASLYTDY
460 470 480 490 500
TFAVWDEDKL VPFAKAYSGL TDAEIRKVDR FVRDNTSERF GPVRSVKPEL
510 520 530 540 550
VMELAFEGLQ RSTRHKSGIA PRFPRIVRWR TDKQPADADR LADLIAMLPE
560
AESKVIASGS EGGD
Length:564
Mass (Da):62,934
Last modified:May 29, 2013 - v1
Checksum:i4B22D9FA0BDF9F38
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ANOF01000063 Genomic DNA Translation: EMI27484.1
RefSeqiWP_008665601.1, NZ_ANOF01000063.1

Genome annotation databases

EnsemblBacteriaiEMI27484; EMI27484; RESH_01886
PATRICifig|1263868.3.peg.2043

Similar proteinsi

Entry informationi

Entry nameiM5SMK8_9PLAN
AccessioniPrimary (citable) accession number: M5SMK8
Entry historyiIntegrated into UniProtKB/TrEMBL: May 29, 2013
Last sequence update: May 29, 2013
Last modified: October 25, 2017
This is version 15 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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