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Protein
Submitted name:

Nuclear receptor subfamily 3, group C, member 2

Gene
N/A
Organism
Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi612 – 687Nuclear receptorPROSITE-ProRule annotationAdd BLAST76

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Nuclear receptor subfamily 3, group C, member 2Imported
OrganismiXiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus)Imported
Taxonomic identifieri8083 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeCyprinodontiformesPoeciliidaePoeciliinaeXiphophorus
Proteomesi
  • UP000002852 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi8083.ENSXMAP00000013853

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini612 – 687Nuclear receptorInterPro annotationAdd BLAST76
Domaini742 – 973NR LBDInterPro annotationAdd BLAST232

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.SAAS annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3575 Eukaryota
ENOG410XRZC LUCA
GeneTreeiENSGT00760000118887
InParanoidiM4AHA9
KOiK08555
OMAiSKICLVC
OrthoDBiEOG091G0166

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
IPR001628 Znf_hrmn_rcpt
IPR013088 Znf_NHR/GATA
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PF00105 zf-C4, 1 hit
PRINTSiPR00398 STRDHORMONER
PR00047 STROIDFINGER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SM00399 ZnF_C4, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit
PS00031 NUCLEAR_REC_DBD_1, 1 hit
PS51030 NUCLEAR_REC_DBD_2, 1 hit

Sequencei

Sequence statusi: Complete.

M4AHA9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METKGYQSFF DGEDAENKWS EAPSTMEYSC STEDSSLTSS DILMDVVNVS
60 70 80 90 100
CCAGSLAANS KDKNTKKQEQ PTLQLSQSQP FVLPHFNNTL HGLKQEMDSK
110 120 130 140 150
ELSKTVAESM GLYMNAAREA DFAFSHHGGS SSPGKPYPVC GRSLEENQCG
160 170 180 190 200
SKKSPKLKPF GFQQPGSTPR ECTTGTVVSS ASMLVSSLSC SPQTSSCISS
210 220 230 240 250
PGGSNNMVSS TTSPTCFGPL CSSASSPGSQ TLCAAALANI KSRNSVTCSP
260 270 280 290 300
VESSTVGSPP LTSPLNVMRS PMSSPQSMSS VRSPPSCSTT CNIRSSVSSP
310 320 330 340 350
TCGSCTAATN SSNTARLSIS SPASGGPMAA SSPQNPSSVG FPVSSPAGGI
360 370 380 390 400
GLVQNDTNSP DAEGMTRDTD FKNFEFPKVE MVDGEVFSVG LDQMGMVKYI
410 420 430 440 450
KNEPETDFRS MCLGSSKCNV SSAPLITQIK SEPNKNEGCM NPQPFGETSP
460 470 480 490 500
SLGLFPASET TYLSLRNNID EYSLSGILGP PVSSVNGNYE TDLFSNNVLS
510 520 530 540 550
KGVKQESNDG SYYQENNSMS TSAIVGVNSG GHSFHYQIGA QGTMSFTRHD
560 570 580 590 600
MRDPSNPLLN LISPVTALME SWKSRPGMSQ GSLSARSEGF SGQNCIADSM
610 620 630 640 650
SSSALRQPSS TAKVCLVCGD EASGCHYGVV TCGSCKVFFK RAVEGQHNYL
660 670 680 690 700
CAGRNDCIID KIRRKNCPAC RVRKCLQAGM NLGARKSKKL KLKGVNEDLQ
710 720 730 740 750
SSKDAQIATG GVGGGYLSSE KELTASAANA LVPHGPGVVT PFLPPSICSV
760 770 780 790 800
LELIEPEEVY SGYDNAQPDT TDHLLSSLNR LAGKQMVRMV KWAKVLPGFR
810 820 830 840 850
GLPIEDQITL IQYSWMCLSS FCLSWRSYKH TNGQMLYFAP DLIFNEERMR
860 870 880 890 900
QSAMYDLCLG MRQVSQEFVR LQLTYDEFLS MKVLLLLSTV PKEGLKNQAA
910 920 930 940 950
FEEMRVNYIK ELRRSVGKAT NNSGQTWQRF FQLTKLLDAM HDLVGNLLDF
960 970 980 990
CFYTFRESQA LKVEFPEMLV EIISDQIPKV ESGLTHTIYF HKK
Length:993
Mass (Da):107,191
Last modified:May 1, 2013 - v1
Checksum:iFCAA1C663C9AFF29
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGAJ01029461 Genomic DNA No translation available.
AGAJ01029462 Genomic DNA No translation available.
AGAJ01029463 Genomic DNA No translation available.
AGAJ01029464 Genomic DNA No translation available.
AGAJ01029465 Genomic DNA No translation available.
AGAJ01029466 Genomic DNA No translation available.
RefSeqiXP_005810768.1, XM_005810711.1

Genome annotation databases

EnsembliENSXMAT00000013870; ENSXMAP00000013853; ENSXMAG00000013809
GeneIDi102235678
KEGGixma:102235678

Similar proteinsi

Entry informationi

Entry nameiM4AHA9_XIPMA
AccessioniPrimary (citable) accession number: M4AHA9
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: May 23, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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