UniProtKB - M4A3S3 (M4A3S3_XIPMA)
Protein
RHD domain-containing protein
Gene
N/A
Organism
Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus)
Status
Functioni
GO - Molecular functioni
- DNA binding Source: InterPro
- DNA-binding transcription factor activity Source: InterPro
Names & Taxonomyi
Protein namesi | Recommended name: RHD domain-containing proteinInterPro annotation |
Organismi | Xiphophorus maculatus (Southern platyfish) (Platypoecilus maculatus)Imported |
Taxonomic identifieri | 8083 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Neoteleostei › Acanthomorphata › Ovalentaria › Atherinomorphae › Cyprinodontiformes › Poeciliidae › Poeciliinae › Xiphophorus |
Proteomesi |
|
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 411 – 593 | RHDInterPro annotationAdd BLAST | 183 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 195 – 304 | DisorderedSequence analysisAdd BLAST | 110 | |
Regioni | 355 – 374 | DisorderedSequence analysisAdd BLAST | 20 | |
Regioni | 832 – 897 | DisorderedSequence analysisAdd BLAST | 66 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 195 – 213 | PolarSequence analysisAdd BLAST | 19 | |
Compositional biasi | 272 – 304 | PolarSequence analysisAdd BLAST | 33 | |
Compositional biasi | 832 – 853 | PolarSequence analysisAdd BLAST | 22 | |
Compositional biasi | 863 – 883 | PolarSequence analysisAdd BLAST | 21 |
Phylogenomic databases
eggNOGi | ENOG502QTX8, Eukaryota |
GeneTreei | ENSGT00940000157616 |
HOGENOMi | CLU_010185_1_0_1 |
InParanoidi | M4A3S3 |
OMAi | RGLGACN |
OrthoDBi | 277998at2759 |
Family and domain databases
Gene3Di | 2.60.40.10, 1 hit 2.60.40.340, 1 hit |
InterProi | View protein in InterPro IPR013783, Ig-like_fold IPR014756, Ig_E-set IPR002909, IPT_dom IPR008366, NFAT IPR015647, NFAT1 IPR008967, p53-like_TF_DNA-bd IPR032397, RHD_dimer IPR011539, RHD_DNA_bind_dom IPR037059, RHD_DNA_bind_dom_sf |
PANTHERi | PTHR12533, PTHR12533, 1 hit PTHR12533:SF5, PTHR12533:SF5, 1 hit |
Pfami | View protein in Pfam PF16179, RHD_dimer, 1 hit PF00554, RHD_DNA_bind, 1 hit |
PRINTSi | PR01789, NUCFACTORATC |
SMARTi | View protein in SMART SM00429, IPT, 1 hit |
SUPFAMi | SSF49417, SSF49417, 1 hit SSF81296, SSF81296, 1 hit |
PROSITEi | View protein in PROSITE PS50254, REL_2, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
M4A3S3-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MQDTSSLSVK AKFNFGAAAG AAAGQERGLQ RLKSTAAADM KSAEEDAYNY
60 70 80 90 100
TPNVSLPIGM GNPCLSTQYH TLQSSPVIPV SSCHQTGYSV QNDNHAASSY
110 120 130 140 150
YLPQALRPNG APALESPRIE ITAYSQYPED EVEASGREDH IIKRGVNSIV
160 170 180 190 200
TLTLPNVDGY RDPSCLSPAS SISSRSCNSE ASSYESGFYN YDNSPQNSPW
210 220 230 240 250
QSPSVSPRGS SSLLSCPHAI GPAASPHHSP SNSPQIGAMA EEGWPAQPRG
260 270 280 290 300
SRPNSPSCSG VGGGNSGGIG KRKYSFSGSS YQQTSCSPNQ SPTPSSHGSP
310 320 330 340 350
RVSVTDENWL TNTNQYTNLA IVAAINALTT DGMADMGEGI PIKTRKTMLD
360 370 380 390 400
LSPSMSLKVE PGGEDLGPEG ELRHDEYPSR LSLKKENYCG GFLDVPQHPY
410 420 430 440 450
SWSKPKPYLS PSLPALDWQL PSCSGPYSLQ IEVQPKSHHR AHYETEGSRG
460 470 480 490 500
AVKALSGGHP VVQLYGYMES EPLTLQLFIG TADDRLLRPH AFYQVHRITG
510 520 530 540 550
KTVSTASHEV MQSNTKMLEI PLLPENNMRA IIDCAGILKL RNSDIELRKG
560 570 580 590 600
ETDIGRKNTR VRLVFRVHIN QPNGRTVSLQ VASNPIECSQ RSAQELPLVE
610 620 630 640 650
KQSVESYPTT GGKMMLLGGL NFLPESKVVF VEKAQDGHHL WETEAKVDKD
660 670 680 690 700
SVKTNTLVVE IPPYRNQRIS SPVQVNFYVC NGKRKRSQYQ RFTYVPANVP
710 720 730 740 750
IIKTEPTDEY DSLGSVGLSM HSKPYYGQPR LTSIMPVAEP DPCLVGGYPP
760 770 780 790 800
CPPRHAAMPP SSPSSSPTLH DLSPVAYNKC LPNSPTRATP PGTVAPPIQE
810 820 830 840 850
TPCCPSLPYP TSPDHNSSLV VLHSQGSPGS LGYQHSVYAN SSSSSSPVSH
860 870 880 890 900
PSTPGGPAET PFFQAYSPSQ AEASGSSAQA AGSPPSLLAE DATPPSMDIT
910 920 930
IKQEPQELDQ MYLDDVNEII RNDLSSISVH THA
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketA0A3B5QU82 | A0A3B5QU82_XIPMA | RHD domain-containing protein | 694 | Annotation score: |
Genome annotation databases
Ensembli | ENSXMAT00000009131; ENSXMAP00000009117; ENSXMAG00000009087 |
Similar proteinsi
Cross-referencesi
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 8083.ENSXMAP00000009117 |
Genome annotation databases
Ensembli | ENSXMAT00000009131; ENSXMAP00000009117; ENSXMAG00000009087 |
Phylogenomic databases
eggNOGi | ENOG502QTX8, Eukaryota |
GeneTreei | ENSGT00940000157616 |
HOGENOMi | CLU_010185_1_0_1 |
InParanoidi | M4A3S3 |
OMAi | RGLGACN |
OrthoDBi | 277998at2759 |
Family and domain databases
Gene3Di | 2.60.40.10, 1 hit 2.60.40.340, 1 hit |
InterProi | View protein in InterPro IPR013783, Ig-like_fold IPR014756, Ig_E-set IPR002909, IPT_dom IPR008366, NFAT IPR015647, NFAT1 IPR008967, p53-like_TF_DNA-bd IPR032397, RHD_dimer IPR011539, RHD_DNA_bind_dom IPR037059, RHD_DNA_bind_dom_sf |
PANTHERi | PTHR12533, PTHR12533, 1 hit PTHR12533:SF5, PTHR12533:SF5, 1 hit |
Pfami | View protein in Pfam PF16179, RHD_dimer, 1 hit PF00554, RHD_DNA_bind, 1 hit |
PRINTSi | PR01789, NUCFACTORATC |
SMARTi | View protein in SMART SM00429, IPT, 1 hit |
SUPFAMi | SSF49417, SSF49417, 1 hit SSF81296, SSF81296, 1 hit |
PROSITEi | View protein in PROSITE PS50254, REL_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | M4A3S3_XIPMA | |
Accessioni | M4A3S3Primary (citable) accession number: M4A3S3 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 1, 2013 |
Last sequence update: | May 1, 2013 | |
Last modified: | February 10, 2021 | |
This is version 46 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |