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Protein
Submitted name:

C-C motif chemokine receptor 6

Gene

CCR6

Organism
Latimeria chalumnae (West Indian ocean coelacanth)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionG-protein coupled receptorUniRule annotationSAAS annotation, Receptor, Transducer

Names & Taxonomyi

Protein namesi
Submitted name:
C-C motif chemokine receptor 6Imported
Gene namesi
Name:CCR6Imported
OrganismiLatimeria chalumnae (West Indian ocean coelacanth)Imported
Taxonomic identifieri7897 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiCoelacanthiformesCoelacanthidaeLatimeria
Proteomesi
  • UP000008672 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei72 – 99HelicalSequence analysisAdd BLAST28
Transmembranei108 – 128HelicalSequence analysisAdd BLAST21
Transmembranei148 – 169HelicalSequence analysisAdd BLAST22
Transmembranei190 – 209HelicalSequence analysisAdd BLAST20
Transmembranei244 – 266HelicalSequence analysisAdd BLAST23
Transmembranei278 – 299HelicalSequence analysisAdd BLAST22
Transmembranei319 – 342HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi7897.ENSLACP00000023429

Structurei

3D structure databases

ProteinModelPortaliM3XL23
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini88 – 339G_PROTEIN_RECEP_F1_2InterPro annotationAdd BLAST252

Sequence similaritiesi

Belongs to the G-protein coupled receptor 1 family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG410IKPR Eukaryota
ENOG410XSP7 LUCA
GeneTreeiENSGT00760000118785
InParanoidiM3XL23
KOiK04181
OMAiIMKDLWC
OrthoDBiEOG091G08B0

Family and domain databases

CDDicd15172 7tmA_CCR6, 1 hit
InterProiView protein in InterPro
IPR004067 Chemokine_CCR6
IPR000355 Chemokine_rcpt
IPR000276 GPCR_Rhodpsn
IPR017452 GPCR_Rhodpsn_7TM
PANTHERiPTHR10489:SF611 PTHR10489:SF611, 1 hit
PfamiView protein in Pfam
PF00001 7tm_1, 1 hit
PRINTSiPR00657 CCCHEMOKINER
PR01529 CHEMOKINER6
PR00237 GPCRRHODOPSN
PROSITEiView protein in PROSITE
PS00237 G_PROTEIN_RECEP_F1_1, 1 hit
PS50262 G_PROTEIN_RECEP_F1_2, 1 hit

Sequencei

Sequence statusi: Complete.

M3XL23-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKGNLSLGTT ELMQLGENNP TTQITMEGNL SLGTTEMLAN MTTACDDYSC
60 70 80 90 100
DYTIDFEATP CSMSDIKKHV QIFVPVIYLF VCVFGLIGNS LVIVTYAFYK
110 120 130 140 150
KSKSMTDVYL VNLAIADLFF VLTLPFNAVY RASQWVFTEI PCKLVRGIYG
160 170 180 190 200
INFYSSMLML ALISIDRYIA IVQATRSFKM RAATLAYSRY ICIAVWIFAS
210 220 230 240 250
MISVPDFVFS SVYMHDLDNR TVCEPKYPMG FGSQLKLLTL GMQITIGFCI
260 270 280 290 300
PLWIIITCYS FIINTLHQAQ NFQRHKAVRV VIAVVLVFLL CQVPYNIILL
310 320 330 340 350
NEAINFFEDT CSTKKFNTMA YYITQCLAFF HCCLNPVLYA FIGVKFRNYF
360 370 380 390
IKIMQDLWCL SKKYMTVRRS SRMSSEVFSS RRTSEVLDVD NPSSFTM
Length:397
Mass (Da):45,348
Last modified:May 1, 2013 - v1
Checksum:i50D8C71E710C9E68
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01085536 Genomic DNA No translation available.
AFYH01085537 Genomic DNA No translation available.
AFYH01085538 Genomic DNA No translation available.
AFYH01085539 Genomic DNA No translation available.
AFYH01085540 Genomic DNA No translation available.
AFYH01085541 Genomic DNA No translation available.
RefSeqiXP_014344853.1, XM_014489367.1
XP_014344854.1, XM_014489368.1

Genome annotation databases

EnsembliENSLACT00000025034; ENSLACP00000023429; ENSLACG00000022640
GeneIDi102357098
KEGGilcm:102357098

Entry informationi

Entry nameiM3XL23_LATCH
AccessioniPrimary (citable) accession number: M3XL23
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: March 28, 2018
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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