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Protein

DNA-directed RNA polymerase subunit H

Gene

rpoH

Organism
Sulfolobus acidocaldarius Ron12/I
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseUniRule annotationImported, Transferase
Biological processTranscription

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunit HUniRule annotation (EC:2.7.7.6UniRule annotation)
Gene namesi
Name:rpoHUniRule annotationImported
ORF Names:SacRon12I_03340Imported
OrganismiSulfolobus acidocaldarius Ron12/IImported
Taxonomic identifieri1028567 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000011280 Componenti: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymeraseUniRule annotationSAAS annotationImported

Structurei

3D structure databases

ProteinModelPortaliM1J0T4
SMRiM1J0T4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 81RNA_pol_Rpb5_CInterPro annotationAdd BLAST73

Sequence similaritiesi

Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.UniRule annotation

Phylogenomic databases

KOiK03053

Family and domain databases

Gene3Di3.90.940.20, 1 hit
HAMAPiMF_00025 RNApol_RpoH_RPB5, 1 hit
InterProiView protein in InterPro
IPR000783 RNA_pol_subH/Rpb5_C
IPR020608 RNA_pol_subH/Rpb5_CS
IPR039531 Rpb5-like
IPR035913 RPB5-like_sf
IPR020609 RpoH/RPB5
PANTHERiPTHR10535 PTHR10535, 1 hit
PfamiView protein in Pfam
PF01191 RNA_pol_Rpb5_C, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005155 RNA_pol_subH/Rpb5_C, 1 hit
SUPFAMiSSF55287 SSF55287, 1 hit
PROSITEiView protein in PROSITE
PS01110 RNA_POL_H_23KD, 1 hit

Sequencei

Sequence statusi: Complete.

M1J0T4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRSSSKKKID ISNHELVPKH EILQLEEAYK LVKELGIKPE QLPWIRASDP
60 70 80
VAKSIGAKPG DIIKITRKSP FTGESVTYRY VITG
Length:84
Mass (Da):9,460
Last modified:May 1, 2013 - v1
Checksum:i4B03C8B6FBA9FD9A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002818 Genomic DNA Translation: AGE72916.1
RefSeqiWP_011277576.1, NC_020247.1

Genome annotation databases

EnsemblBacteriaiAGE72916; AGE72916; SacRon12I_03340
GeneIDi3472540
KEGGisacr:SacRon12I_03340
PATRICifig|1028567.7.peg.657

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002818 Genomic DNA Translation: AGE72916.1
RefSeqiWP_011277576.1, NC_020247.1

3D structure databases

ProteinModelPortaliM1J0T4
SMRiM1J0T4
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGE72916; AGE72916; SacRon12I_03340
GeneIDi3472540
KEGGisacr:SacRon12I_03340
PATRICifig|1028567.7.peg.657

Phylogenomic databases

KOiK03053

Family and domain databases

Gene3Di3.90.940.20, 1 hit
HAMAPiMF_00025 RNApol_RpoH_RPB5, 1 hit
InterProiView protein in InterPro
IPR000783 RNA_pol_subH/Rpb5_C
IPR020608 RNA_pol_subH/Rpb5_CS
IPR039531 Rpb5-like
IPR035913 RPB5-like_sf
IPR020609 RpoH/RPB5
PANTHERiPTHR10535 PTHR10535, 1 hit
PfamiView protein in Pfam
PF01191 RNA_pol_Rpb5_C, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005155 RNA_pol_subH/Rpb5_C, 1 hit
SUPFAMiSSF55287 SSF55287, 1 hit
PROSITEiView protein in PROSITE
PS01110 RNA_POL_H_23KD, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiM1J0T4_9CREN
AccessioniPrimary (citable) accession number: M1J0T4
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: November 7, 2018
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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