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Protein

50S ribosomal protein L18

Gene

rpl18

Organism
Sulfolobus acidocaldarius N8
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L18UniRule annotationSAAS annotation
Gene namesi
Name:rpl18UniRule annotation
ORF Names:SacN8_02805Imported
OrganismiSulfolobus acidocaldarius N8Imported
Taxonomic identifieri1028566 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
Proteomesi
  • UP000011281 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts the 5S and 23S rRNAs.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliM1IT77
SMRiM1IT77
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini139 – 194Ribosomal_L18_cInterPro annotationAdd BLAST56

Sequence similaritiesi

Belongs to the universal ribosomal protein uL18 family.UniRule annotation

Phylogenomic databases

KOiK02881

Family and domain databases

HAMAPiMF_01337_A Ribosomal_L18_A, 1 hit
InterProiView protein in InterPro
IPR005485 Rbsml_L5_euk/L18_arc
IPR025607 Rbsml_L5e/L18P_C
PANTHERiPTHR23410 PTHR23410, 2 hits
PfamiView protein in Pfam
PF14204 Ribosomal_L18_c, 1 hit
PF17144 Ribosomal_L5e, 1 hit

Sequencei

Sequence statusi: Complete.

M1IT77-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MTQGPNYRIK FRRRREGKTD YYTRYTYVIN NAIRFVPRLT NKYVIVSVSK
60 70 80 90 100
FDQKGDIMIA YAHSIELVKK YGWKGDTNNT PAAYLTGYLA GLRAVKSGVK
110 120 130 140 150
AAVSDIGLFV PVKGGRIFAV IKGAIDAGLK VPVGDLGKLK DRVNGSHISA
160 170 180 190
YAQKLKNENQ ELYNKLFSSY IQRGLDPVLL PQHFEEVLNK IKENGGK
Length:197
Mass (Da):22,105
Last modified:May 1, 2013 - v1
Checksum:i3908018D5FBF2571
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002817 Genomic DNA Translation: AGE70539.1
RefSeqiWP_011277472.1, NC_020246.1

Genome annotation databases

EnsemblBacteriaiAGE70539; AGE70539; SacN8_02805
GeneIDi3473216
KEGGisacn:SacN8_02805
PATRICifig|1028566.6.peg.555

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002817 Genomic DNA Translation: AGE70539.1
RefSeqiWP_011277472.1, NC_020246.1

3D structure databases

ProteinModelPortaliM1IT77
SMRiM1IT77
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGE70539; AGE70539; SacN8_02805
GeneIDi3473216
KEGGisacn:SacN8_02805
PATRICifig|1028566.6.peg.555

Phylogenomic databases

KOiK02881

Family and domain databases

HAMAPiMF_01337_A Ribosomal_L18_A, 1 hit
InterProiView protein in InterPro
IPR005485 Rbsml_L5_euk/L18_arc
IPR025607 Rbsml_L5e/L18P_C
PANTHERiPTHR23410 PTHR23410, 2 hits
PfamiView protein in Pfam
PF14204 Ribosomal_L18_c, 1 hit
PF17144 Ribosomal_L5e, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiM1IT77_9CREN
AccessioniPrimary (citable) accession number: M1IT77
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2013
Last sequence update: May 1, 2013
Last modified: October 25, 2017
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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