Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 45 (11 Dec 2019)
Sequence version 1 (03 Apr 2013)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein
Submitted name:

Uncharacterized protein

Gene

102586108

Organism
Solanum tuberosum (Potato)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandMetal-binding, Zinc

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:102586108Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSolanum tuberosum (Potato)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4113 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000011115 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

ExpressionAtlas, Differential and Baseline Expression

More...
ExpressionAtlasi
M1B473 baseline

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
4113.PGSC0003DMT400036774

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini155 – 216PHD-typeInterPro annotationAdd BLAST62
Domaini158 – 214RING-typeInterPro annotationAdd BLAST57

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 32DisorderedSequence analysisAdd BLAST32
Regioni95 – 122DisorderedSequence analysisAdd BLAST28
Regioni1094 – 1113DisorderedSequence analysisAdd BLAST20

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 28PolarSequence analysisAdd BLAST28

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1952 Eukaryota
ENOG410XR02 LUCA

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
M1B473

KEGG Orthology (KO)

More...
KOi
K12236

Identification of Orthologs from Complete Genome Data

More...
OMAi
HPCEHPP

Database of Orthologous Groups

More...
OrthoDBi
299100at2759

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR034078 NFX1_fam
IPR019786 Zinc_finger_PHD-type_CS
IPR000967 Znf_NFX1
IPR019787 Znf_PHD-finger
IPR001841 Znf_RING

The PANTHER Classification System

More...
PANTHERi
PTHR12360 PTHR12360, 1 hit

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01422 zf-NF-X1, 7 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00438 ZnF_NFX, 9 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS01359 ZF_PHD_1, 1 hit
PS50016 ZF_PHD_2, 1 hit
PS50089 ZF_RING_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

M1B473-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSFPAQNNRR NNNSNRPRNI NNNPVVQSGG ARREWVARGS TPTNTVPFST
60 70 80 90 100
APVTPVSTTT VVTPGFGGNG RDNDNVPVVP VNRFQNQNQT YVEPKFNRGT
110 120 130 140 150
YGNQRERGRG SYNHQENRME RPVREVSGRI NQEQVKDPNL PQLVQEIEEK
160 170 180 190 200
LLKGNIECMI CYDMVRRSAP MWSCSSCYSI FHLHCTKKWA RAPTSVDTSA
210 220 230 240 250
EKNQRFNWRC PGCQSVQLTS SRDIRYLCFC GKRQDPPSDL YLTPHSCGEP
260 270 280 290 300
CGKKLEKELP GNGLSEEDLC PHVCVLQCHP GPCPPCKAFA PARSCPCGKE
310 320 330 340 350
VITTRCSDRK SVLTCGQQCG KLLDCGRHRC EQTCHVGPCG HCQIVVDAYC
360 370 380 390 400
FCKKKTESVL CGDMGVKGSI KMEDGVFSCN SVCGKKLSCG NHICRELCHP
410 420 430 440 450
GPCGDCALLP SKVKACCCGK TSLEEERHSC LDPIPTCSKV CGKRLRCGVH
460 470 480 490 500
RCEAVCHSGD CAPCLVPVNQ RCRCGSTSRT VECYRTQAED EQFTCDRPCG
510 520 530 540 550
QKKNCGRHRC SERCCPLSNP KNSITGGWNP HFCSMPCEKK LRCGQHSCES
560 570 580 590 600
LCHSGHCPPC LETIFTDLTC ACGRTSIPPP LPCGTPLPSC QLPCSVSQPC
610 620 630 640 650
GHPPTHSCHF GDCLPCAVPV AKECVGGHVI LRNIPCGSKD IRCNKLCGKT
660 670 680 690 700
RQCGLHACAR TCHPSPCDVS AGPSNGSRDS CGQTCGAPRR DCRHSCTALC
710 720 730 740 750
HPSSSCPDVR CEFPVTITCS CGRITANVPC DAGGQIVDSV FEASIIHKLP
760 770 780 790 800
SSLQPIELNG KKVPLGQRKL TCDDECAKME KKKVLSDAFG ITPPNLEALH
810 820 830 840 850
FGENAAVSEV LGELLRRDAK WVLSIEERCK FLVLGRSRGG VNALKVHVFC
860 870 880 890 900
PMSKEKRDAI RLIAARWKLS VNAAGWEPKR FIAVHVTPKS KAPTRILGPK
910 920 930 940 950
GCTVNNIAQP AVFDSLVDMD PRLVVALFDL PRDADISALV LRFGGECELV
960 970 980 990 1000
WLNDKNALAV FNDPARAATA MRRLDQGSAY CGAAVVHQSG VASAVASATN
1010 1020 1030 1040 1050
VWGVSGGAKD GGGVAALKGN PWKKAVVQEP HLRESLWDAD EWSKNPTDLA
1060 1070 1080 1090 1100
APSAWRANEA PPTASSNRWS VLEPEITSSL PRVSITIQKP VTETEVGGSV
1110 1120
LPPKPQDVGI DDMADVVDDW DKAYD
Length:1,125
Mass (Da):122,289
Last modified:April 3, 2013 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i1A4C133D7934EE64
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
M1B472M1B472_SOLTU
Uncharacterized protein
102586108
762Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

NCBI Reference Sequences

More...
RefSeqi
XP_006341494.1, XM_006341432.2

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
PGSC0003DMT400036774; PGSC0003DMT400036774; PGSC0003DMG400014182

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
102586108

Gramene; a comparative resource for plants

More...
Gramenei
PGSC0003DMT400036774; PGSC0003DMT400036774; PGSC0003DMG400014182

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
sot:102586108

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

RefSeqiXP_006341494.1, XM_006341432.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400036774

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400036774; PGSC0003DMT400036774; PGSC0003DMG400014182
GeneIDi102586108
GrameneiPGSC0003DMT400036774; PGSC0003DMT400036774; PGSC0003DMG400014182
KEGGisot:102586108

Phylogenomic databases

eggNOGiKOG1952 Eukaryota
ENOG410XR02 LUCA
InParanoidiM1B473
KOiK12236
OMAiHPCEHPP
OrthoDBi299100at2759

Gene expression databases

ExpressionAtlasiM1B473 baseline

Family and domain databases

InterProiView protein in InterPro
IPR034078 NFX1_fam
IPR019786 Zinc_finger_PHD-type_CS
IPR000967 Znf_NFX1
IPR019787 Znf_PHD-finger
IPR001841 Znf_RING
PANTHERiPTHR12360 PTHR12360, 1 hit
PfamiView protein in Pfam
PF01422 zf-NF-X1, 7 hits
SMARTiView protein in SMART
SM00438 ZnF_NFX, 9 hits
PROSITEiView protein in PROSITE
PS01359 ZF_PHD_1, 1 hit
PS50016 ZF_PHD_2, 1 hit
PS50089 ZF_RING_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiM1B473_SOLTU
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: M1B473
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: December 11, 2019
This is version 45 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again