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Protein
Submitted name:

Uncharacterized protein

Gene

102596877

Organism
Solanum tuberosum (Potato)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:102596877Imported
OrganismiSolanum tuberosum (Potato)Imported
Taxonomic identifieri4113 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeSolanoideaeSolaneaeSolanum
Proteomesi
  • UP000011115 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiM1AV43 baseline and differential

Interactioni

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400031045

Structurei

3D structure databases

SMRiM1AV43
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 158NACInterPro annotationAdd BLAST145

Phylogenomic databases

eggNOGiENOG410IK0N Eukaryota
ENOG410YED8 LUCA
InParanoidiM1AV43
OMAiEENMTTH
OrthoDBiEOG09360MWE

Family and domain databases

Gene3Di3.30.310.150, 1 hit
InterProiView protein in InterPro
IPR003441 NAC-dom
IPR036093 NAC_dom_sf
PfamiView protein in Pfam
PF02365 NAM, 1 hit
SUPFAMiSSF101941 SSF101941, 1 hit
PROSITEiView protein in PROSITE
PS51005 NAC, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

M1AV43-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEKVNFVKNG VLRLPPGFRF RPTDEELVVQ YLKRKVFSFP LPASIIPEVE
60 70 80 90 100
VYKSDPWDLP GDTEQEKYFF STKEVKYPNG NRSNRATNSG YWKATGIDKQ
110 120 130 140 150
IVLRGQQVGL KKTLVFYRGK SPHGCRTNWI MHEYRLANLE SNHHPIQGNW
160 170 180 190 200
VICRIFLKKR GNTKNKEENM TTHDEVRNRE VGKDSPLVSV KTSPRYSETL
210 220 230 240 250
ASANSEVKKK TSMIFYDFMG RDNSNGVAAS SSSSGITDLT TTNEESDDHE
260
ESTSSFNSFT TFRRKN
Length:266
Mass (Da):30,493
Last modified:April 3, 2013 - v1
Checksum:i3D10459D9753A870
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
M1AV44M1AV44_SOLTU
Uncharacterized protein
102596877
97Annotation score:

Sequence databases

RefSeqiXP_006366089.1, XM_006366027.2

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400031045; PGSC0003DMT400031045; PGSC0003DMG400011891
GeneIDi102596877
GrameneiPGSC0003DMT400031045; PGSC0003DMT400031045; PGSC0003DMG400011891
KEGGisot:102596877

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_006366089.1, XM_006366027.2

3D structure databases

SMRiM1AV43
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4113.PGSC0003DMT400031045

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPGSC0003DMT400031045; PGSC0003DMT400031045; PGSC0003DMG400011891
GeneIDi102596877
GrameneiPGSC0003DMT400031045; PGSC0003DMT400031045; PGSC0003DMG400011891
KEGGisot:102596877

Phylogenomic databases

eggNOGiENOG410IK0N Eukaryota
ENOG410YED8 LUCA
InParanoidiM1AV43
OMAiEENMTTH
OrthoDBiEOG09360MWE

Gene expression databases

ExpressionAtlasiM1AV43 baseline and differential

Family and domain databases

Gene3Di3.30.310.150, 1 hit
InterProiView protein in InterPro
IPR003441 NAC-dom
IPR036093 NAC_dom_sf
PfamiView protein in Pfam
PF02365 NAM, 1 hit
SUPFAMiSSF101941 SSF101941, 1 hit
PROSITEiView protein in PROSITE
PS51005 NAC, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiM1AV43_SOLTU
AccessioniPrimary (citable) accession number: M1AV43
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: November 7, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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