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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Hordeum vulgare subsp. vulgare (Domesticated barley)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi54 – 121HMG boxPROSITE-ProRule annotationAdd BLAST68

GO - Molecular functioni

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiHordeum vulgare subsp. vulgare (Domesticated barley)Imported
Taxonomic identifieri112509 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladePooideaeTriticodaeTriticeaeHordeinaeHordeum
Proteomesi
  • UP000011116 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 121HMG boxInterPro annotationAdd BLAST68

Family and domain databases

Gene3Di1.10.30.10, 1 hit
InterProiView protein in InterPro
IPR009071 HMG_box_dom
IPR036910 HMG_box_dom_sf
PfamiView protein in Pfam
PF00505 HMG_box, 1 hit
SMARTiView protein in SMART
SM00398 HMG, 1 hit
SUPFAMiSSF47095 SSF47095, 1 hit
PROSITEiView protein in PROSITE
PS50118 HMG_BOX_2, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 6 potential isoforms that are computationally mapped.iShow all

M0W3D6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGSKSTKAIL YNYSEEPALT TLAPTMPVNN TGSKGGHRRR QRRKKLSTTD
60 70 80 90 100
PRHPKPNRSG YNFFFQDQHR KLKPEYPSQD RLISKMIGER WNNLSPEDKA
110 120 130 140 150
VYQERGVQDK ERYQSQLAAY REELRTGQPI SNSMPIIGND APIQQTFPQT
160 170 180 190 200
EVTIDEVDSK VSKGDMLLSN QRYNNSDEGV DSGGKLVEDE EFNTDTSPEP
210 220 230
SMDTTDSPGP LDPSADGDRF ELRRRENPNK NEKQSTAPK
Length:239
Mass (Da):27,136
Last modified:April 3, 2013 - v1
Checksum:i569D668253AA166F
GO

Computationally mapped potential isoform sequencesi

There are 6 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287U3X7A0A287U3X7_HORVV
Uncharacterized protein
460Annotation score:
F2CVP8F2CVP8_HORVV
Predicted protein
451Annotation score:
A0A287U329A0A287U329_HORVV
Uncharacterized protein
377Annotation score:
A0A287U356A0A287U356_HORVV
Uncharacterized protein
153Annotation score:
A0A287U361A0A287U361_HORVV
Uncharacterized protein
324Annotation score:
A0A287U3X3A0A287U3X3_HORVV
Uncharacterized protein
86Annotation score:

Genome annotation databases

EnsemblPlantsiHORVU6Hr1G046980.1; HORVU6Hr1G046980.1; HORVU6Hr1G046980
HORVU6Hr1G046980.4; HORVU6Hr1G046980.4; HORVU6Hr1G046980
HORVU6Hr1G046980.5; HORVU6Hr1G046980.5; HORVU6Hr1G046980
GrameneiHORVU6Hr1G046980.1; HORVU6Hr1G046980.1; HORVU6Hr1G046980
HORVU6Hr1G046980.4; HORVU6Hr1G046980.4; HORVU6Hr1G046980
HORVU6Hr1G046980.5; HORVU6Hr1G046980.5; HORVU6Hr1G046980

Similar proteinsi

Entry informationi

Entry nameiM0W3D6_HORVV
AccessioniPrimary (citable) accession number: M0W3D6
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: June 20, 2018
This is version 24 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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