Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

50S ribosomal protein L4

Gene

rpl4lp

Organism
Haloarcula vallismortis ATCC 29715
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Forms part of the polypeptide exit tunnel.UniRule annotation
One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome.UniRule annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationImported, RNA-binding, rRNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciHVAL662477:G1HEV-2161-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L4UniRule annotation
Gene namesi
Name:rpl4lpImported
Synonyms:rpl4UniRule annotation
ORF Names:C437_10923Imported
OrganismiHaloarcula vallismortis ATCC 29715Imported
Taxonomic identifieri662477 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaStenosarchaea groupHalobacteriaHalobacterialesHaloarculaceaeHaloarcula
Proteomesi
  • UP000011534 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL4 family.UniRule annotation

Phylogenomic databases

OrthoDBiPOG093Z07B4

Family and domain databases

Gene3Di3.40.1370.10, 1 hit
HAMAPiMF_01328_A Ribosomal_L4_A, 1 hit
InterProiView protein in InterPro
IPR002136 Ribosomal_L4/L1e
IPR013000 Ribosomal_L4/L1e_euk/arc_CS
IPR023574 Ribosomal_L4_dom_sf
IPR019970 Ribosomall_L4
PfamiView protein in Pfam
PF00573 Ribosomal_L4, 1 hit
SUPFAMiSSF52166 SSF52166, 1 hit
TIGRFAMsiTIGR03672 rpl4p_arch, 1 hit
PROSITEiView protein in PROSITE
PS00939 RIBOSOMAL_L1E, 1 hit

Sequencei

Sequence statusi: Complete.

M0JE47-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQATIYDLDG NTDGEVDLPD VFETPVRSDL IGKAVRAAQA NRKQDYGSDE
60 70 80 90 100
YAGLRTPAES FGSGRGQAHV PKQDGRARRV PQAVKGRSAH PPKAEKDRSL
110 120 130 140 150
DLNDKERQLA VRSALAATAD ADLVADRGHE FDRDEVPVVV SDDFEDLVKT
160 170 180 190 200
QEVVSLLEAL DVDADIERAD ETKIKAGQGS ARGRKYRRPA SILFVTSDEP
210 220 230 240
STAARNLAGA DVATASEVNS EDLAPGGVPG RLTVFTESAL AEVAER
Length:246
Mass (Da):26,396
Last modified:April 3, 2013 - v1
Checksum:iDF3ACBD778641330
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AOLQ01000042 Genomic DNA Translation: EMA06613.1
RefSeqiWP_004516970.1, NZ_AOLQ01000042.1

Genome annotation databases

EnsemblBacteriaiEMA06613; EMA06613; C437_10923
PATRICifig|662477.6.peg.2114

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AOLQ01000042 Genomic DNA Translation: EMA06613.1
RefSeqiWP_004516970.1, NZ_AOLQ01000042.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiEMA06613; EMA06613; C437_10923
PATRICifig|662477.6.peg.2114

Phylogenomic databases

OrthoDBiPOG093Z07B4

Enzyme and pathway databases

BioCyciHVAL662477:G1HEV-2161-MONOMER

Family and domain databases

Gene3Di3.40.1370.10, 1 hit
HAMAPiMF_01328_A Ribosomal_L4_A, 1 hit
InterProiView protein in InterPro
IPR002136 Ribosomal_L4/L1e
IPR013000 Ribosomal_L4/L1e_euk/arc_CS
IPR023574 Ribosomal_L4_dom_sf
IPR019970 Ribosomall_L4
PfamiView protein in Pfam
PF00573 Ribosomal_L4, 1 hit
SUPFAMiSSF52166 SSF52166, 1 hit
TIGRFAMsiTIGR03672 rpl4p_arch, 1 hit
PROSITEiView protein in PROSITE
PS00939 RIBOSOMAL_L1E, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiM0JE47_HALVA
AccessioniPrimary (citable) accession number: M0JE47
Entry historyiIntegrated into UniProtKB/TrEMBL: April 3, 2013
Last sequence update: April 3, 2013
Last modified: October 10, 2018
This is version 19 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again