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Protein
Submitted name:

Transient receptor potential cation channel subfamily V member 6

Gene

MDA_GLEAN10005344

Organism
Myotis davidii (David's myotis)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionIon channelSAAS annotation, ReceptorImported
Biological processIon transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Transient receptor potential cation channel subfamily V member 6Imported
Gene namesi
ORF Names:MDA_GLEAN10005344Imported
OrganismiMyotis davidii (David's myotis)Imported
Taxonomic identifieri225400 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaChiropteraMicrochiropteraVespertilionidaeMyotis
Proteomesi
  • UP000010556 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei328 – 352HelicalSequence analysisAdd BLAST25
Transmembranei383 – 404HelicalSequence analysisAdd BLAST22
Transmembranei425 – 445HelicalSequence analysisAdd BLAST21
Transmembranei451 – 473HelicalSequence analysisAdd BLAST23
Transmembranei524 – 546HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini48 – 262ANK_REP_REGIONInterPro annotationAdd BLAST215
Repeati116 – 148ANKPROSITE-ProRule annotationAdd BLAST33
Repeati162 – 194ANKPROSITE-ProRule annotationAdd BLAST33

Sequence similaritiesi

Belongs to the transient receptor (TC 1.A.4) family. [View classification]SAAS annotation

Keywords - Domaini

ANK repeatPROSITE-ProRule annotationSAAS annotation, RepeatSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

CDDicd00204 ANK, 1 hit
Gene3Di1.25.40.20, 2 hits
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
IPR005821 Ion_trans_dom
IPR024862 TRPV
IPR008344 TRPV5/TRPV6
IPR008345 TRPV6_channel
PANTHERiPTHR10582 PTHR10582, 2 hits
PfamiView protein in Pfam
PF12796 Ank_2, 1 hit
PF00520 Ion_trans, 1 hit
PRINTSiPR01415 ANKYRIN
PR01765 ECACCHANNEL
PR01766 ECACCHANNEL1
SMARTiView protein in SMART
SM00248 ANK, 4 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 2 hits

Sequencei

Sequence statusi: Complete.

L5LKT0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGLPLPKKTG LILCLWRKFC RWFQRQESWA QSRDEQNLLQ QKRILECPFL
60 70 80 90 100
LAAKENDVHT LNKLLKYQAC EVHQRGVMGE TALHIAALYD NLEAAMVLME
110 120 130 140 150
AAPELVLEPM TSELYEGQTA LHVAIMNQNV NLVRALLAHG ACVSARATGT
160 170 180 190 200
AFRLSPHSHI YFGEHPLSFA ACMGSEEIVR LLIEHGANIR AQDSLGNTVL
210 220 230 240 250
HILVFQPNKT FACQMYNLLL SYDKRGGHQQ SLDLVPNHQG LTPFKLAGVE
260 270 280 290 300
GNTVMFNHLM QKWKHSQGTF GLTTYTLYDL TEIDSSGDEP SLLELIVTTK
310 320 330 340 350
KREARQILDQ TPVKELVSLK WKRYGRPYFC LLGALYVLYI ICFTMCCIYR
360 370 380 390 400
PLKPRTDNRT QPRDNTLLQQ KLLQEAYMTP QDAIRLVGEL VTVIGAVFIL
410 420 430 440 450
IVEIPDIFRV GVTQFFGHTI LGGPFHVLII TYAFMVLVTM VMRLTNTSGE
460 470 480 490 500
VVPMSFALVL GWCNVMYFAR GFQMLGPFTI MIQKTENPDE LGHFYSYPMA
510 520 530 540 550
LFSTFEMFLT IIDGPANYDV DLPFMYSITY AAFAIIATLL MLNLLIAMMG
560 570 580 590 600
DTHWRVAHER DELWRAQVVA TTVMLERKLP RCLWPRSGIF GGDYGLGDRW
610 620 630 640 650
FLRVEDKQDL YQQRVRRYAR AFYHRGSDDL DKDSEKLQAR HPSGPNLSLP
660 670 680 690
TPSVSRSTSR SSTNWEKLRQ GTLKTDLMGV VNRGLEEEGW EYQI
Length:694
Mass (Da):79,147
Last modified:March 6, 2013 - v1
Checksum:i59ACB1359F9144CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB110618 Genomic DNA Translation: ELK27024.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB110618 Genomic DNA Translation: ELK27024.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

CDDicd00204 ANK, 1 hit
Gene3Di1.25.40.20, 2 hits
InterProiView protein in InterPro
IPR002110 Ankyrin_rpt
IPR020683 Ankyrin_rpt-contain_dom
IPR036770 Ankyrin_rpt-contain_sf
IPR005821 Ion_trans_dom
IPR024862 TRPV
IPR008344 TRPV5/TRPV6
IPR008345 TRPV6_channel
PANTHERiPTHR10582 PTHR10582, 2 hits
PfamiView protein in Pfam
PF12796 Ank_2, 1 hit
PF00520 Ion_trans, 1 hit
PRINTSiPR01415 ANKYRIN
PR01765 ECACCHANNEL
PR01766 ECACCHANNEL1
SMARTiView protein in SMART
SM00248 ANK, 4 hits
SUPFAMiSSF48403 SSF48403, 1 hit
PROSITEiView protein in PROSITE
PS50297 ANK_REP_REGION, 1 hit
PS50088 ANK_REPEAT, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiL5LKT0_MYODS
AccessioniPrimary (citable) accession number: L5LKT0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: February 28, 2018
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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