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Protein
Submitted name:

U11/U12 small nuclear ribonucleoprotein 35 kDa protein

Gene

PAL_GLEAN10008793

Organism
Pteropus alecto (Black flying fox)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRibonucleoproteinImported, RNA-bindingPROSITE-ProRule annotation, Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
U11/U12 small nuclear ribonucleoprotein 35 kDa proteinImported
Gene namesi
ORF Names:PAL_GLEAN10008793Imported
OrganismiPteropus alecto (Black flying fox)Imported
Taxonomic identifieri9402 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaChiropteraMegachiropteraPteropodidaePteropodinaePteropus
Proteomesi
  • UP000010552 Componenti: Unassembled WGS sequence

Subcellular locationi

    Keywords - Cellular componenti

    Virion

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)DescriptionActionsGraphical viewLength
    Domaini51 – 129RRMInterPro annotationAdd BLAST79

    Phylogenomic databases

    InParanoidiL5KTX6
    KOiK13155

    Family and domain databases

    CDDicd12237 RRM_snRNP35, 1 hit
    Gene3Di3.30.70.330, 1 hit
    InterProiView protein in InterPro
    IPR012677 Nucleotide-bd_a/b_plait_sf
    IPR035979 RBD_domain_sf
    IPR000504 RRM_dom
    IPR034146 snRNP35_RRM
    PfamiView protein in Pfam
    PF00076 RRM_1, 1 hit
    SMARTiView protein in SMART
    SM00360 RRM, 1 hit
    SUPFAMiSSF54928 SSF54928, 1 hit
    PROSITEiView protein in PROSITE
    PS50102 RRM, 1 hit

    Sequencei

    Sequence statusi: Complete.

    L5KTX6-1 [UniParc]FASTAAdd to basket
    « Hide
            10         20         30         40         50
    MNDWMPIAKE YDPLKAGSID GTDEDPHDRA VWRAMLARYA PNKGVTGDPL
    60 70 80 90 100
    LTLFVARLNL QTKEEKLKEV FSRYGDIRRL RLVRDLVTGF SKGYAFIEYK
    110 120 130 140 150
    EERSLLKAYR DADGLVIDQH EIFVDYELER TLKGWIPRRL GGGLGGKKES
    160 170 180 190 200
    GQLRFGGRDR PFRKPINLPV VKTDQYREGK RDKRERSRSR ERHWESRPRD
    210 220 230 240
    RDHDRGREKR WQEREPPRVW PESDWERERD FRDDRVKGRE KRDRSK
    Length:246
    Mass (Da):29,437
    Last modified:March 6, 2013 - v1
    Checksum:iAAC718DB1E7978A7
    GO

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    KB030576 Genomic DNA Translation: ELK14278.1
    RefSeqiXP_006910043.1, XM_006909981.2

    Genome annotation databases

    GeneIDi102897423
    KEGGipale:102897423

    Similar proteinsi

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBLi
    GenBanki
    DDBJi
    Links Updated
    KB030576 Genomic DNA Translation: ELK14278.1
    RefSeqiXP_006910043.1, XM_006909981.2

    3D structure databases

    ModBaseiSearch...
    MobiDBiSearch...

    Protocols and materials databases

    Structural Biology KnowledgebaseSearch...

    Genome annotation databases

    GeneIDi102897423
    KEGGipale:102897423

    Organism-specific databases

    CTDi11066

    Phylogenomic databases

    InParanoidiL5KTX6
    KOiK13155

    Family and domain databases

    CDDicd12237 RRM_snRNP35, 1 hit
    Gene3Di3.30.70.330, 1 hit
    InterProiView protein in InterPro
    IPR012677 Nucleotide-bd_a/b_plait_sf
    IPR035979 RBD_domain_sf
    IPR000504 RRM_dom
    IPR034146 snRNP35_RRM
    PfamiView protein in Pfam
    PF00076 RRM_1, 1 hit
    SMARTiView protein in SMART
    SM00360 RRM, 1 hit
    SUPFAMiSSF54928 SSF54928, 1 hit
    PROSITEiView protein in PROSITE
    PS50102 RRM, 1 hit
    ProtoNetiSearch...

    Entry informationi

    Entry nameiL5KTX6_PTEAL
    AccessioniPrimary (citable) accession number: L5KTX6
    Entry historyiIntegrated into UniProtKB/TrEMBL: March 6, 2013
    Last sequence update: March 6, 2013
    Last modified: May 23, 2018
    This is version 23 of the entry and version 1 of the sequence. See complete history.
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported
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    Main funding by: National Institutes of Health

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