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Entry version 40 (11 Dec 2019)
Sequence version 1 (06 Mar 2013)
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Protein
Submitted name:

KNAT1

Gene

Potom.002G113300

Organism
Populus tomentosa (Chinese white poplar)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section specifies the position and type of each DNA-binding domain present within the protein.<p><a href='/help/dna_bind' target='_top'>More...</a></p>DNA bindingi271 – 334Homeobox; TALE-typePROSITE-ProRule annotationAdd BLAST64

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
KNAT1Imported
Submitted name:
Kn1-like proteinImported
Submitted name:
Knotted-like proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:Potom.002G113300Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPopulus tomentosa (Chinese white poplar)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri118781 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini250 – 270ELKInterPro annotationAdd BLAST21
Domaini270 – 333HomeoboxInterPro annotationAdd BLAST64

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni28 – 53DisorderedSequence analysisAdd BLAST26
Regioni217 – 247DisorderedSequence analysisAdd BLAST31

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the TALE/KNOX homeobox family.PROSITE-ProRule annotation

Keywords - Domaini

HomeoboxPROSITE-ProRule annotationSAAS annotation

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00086 homeodomain, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR005539 ELK_dom
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR008422 Homeobox_KN_domain
IPR005540 KNOX1
IPR005541 KNOX2

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF03789 ELK, 1 hit
PF05920 Homeobox_KN, 1 hit
PF03790 KNOX1, 1 hit
PF03791 KNOX2, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM01188 ELK, 1 hit
SM00389 HOX, 1 hit
SM01255 KNOX1, 1 hit
SM01256 KNOX2, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46689 SSF46689, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51213 ELK, 1 hit
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

L0AUU4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDYNQMSEN TTPRGNFLYA SQLLAPNSSP YGRTSSGSTV SNQQTQMPLN
60 70 80 90 100
PFHLQSNDQC FQSDTHPIVK TEASTSHAQK FHYPLLRGYQ TINQQQQGSE
110 120 130 140 150
SSSEVEAIKA KIIAHPQYSN LLEAYMDCQK VGAPPEVVAR LAAARQEFES
160 170 180 190 200
RQRSFITSRD NSKDPELDQF MEAYYDMLVK YREELTRPIQ EAMDFMRRIE
210 220 230 240 250
TQLNMICHGP LRIFNSDDKS EGVGSSEDDQ DNSGGETELP EIDPRAEDRE
260 270 280 290 300
LKNHLLRKYS GYLGSLKQEL SKKKKKGKLP KEARQKLLSW WELHYKWPYP
310 320 330 340 350
SETEKVALAE TTGLDQKQIN NWFINQRKRH WKPSEDMQFM VMDGLHPQNA
360
ALYMDGHYMG DGHYRLGP
Length:368
Mass (Da):42,441
Last modified:March 6, 2013 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC7FC4133EECA6688
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
JX986688 Genomic DNA Translation: AFZ78625.1
KP058580 Genomic DNA Translation: AKB11653.1
KP058581 Genomic DNA Translation: AKB11654.1
KP058582 Genomic DNA Translation: AKB11655.1
KP058583 Genomic DNA Translation: AKB11656.1
KP058584 Genomic DNA Translation: AKB11657.1
KP058586 Genomic DNA Translation: AKB11659.1
KP058587 Genomic DNA Translation: AKB11660.1
KP058588 Genomic DNA Translation: AKB11661.1
KP058589 Genomic DNA Translation: AKB11662.1
KP058590 Genomic DNA Translation: AKB11663.1
KP058591 Genomic DNA Translation: AKB11664.1
KP058592 Genomic DNA Translation: AKB11665.1
KP058593 Genomic DNA Translation: AKB11666.1
KP058594 Genomic DNA Translation: AKB11667.1
KP058595 Genomic DNA Translation: AKB11668.1
KP058596 Genomic DNA Translation: AKB11669.1
KP058597 Genomic DNA Translation: AKB11670.1
KP058598 Genomic DNA Translation: AKB11671.1
KP058599 Genomic DNA Translation: AKB11672.1
KP058600 Genomic DNA Translation: AKB11673.1
KP058601 Genomic DNA Translation: AKB11674.1
KP058602 Genomic DNA Translation: AKB11675.1
KP058603 Genomic DNA Translation: AKB11676.1
KP058604 Genomic DNA Translation: AKB11677.1
KP058605 Genomic DNA Translation: AKB11678.1
KP058607 Genomic DNA Translation: AKB11680.1
KP058608 Genomic DNA Translation: AKB11681.1
KP058609 Genomic DNA Translation: AKB11682.1
KP058610 Genomic DNA Translation: AKB11683.1
KP058611 Genomic DNA Translation: AKB11684.1
KP058612 Genomic DNA Translation: AKB11685.1
KP058613 Genomic DNA Translation: AKB11686.1
KP058614 Genomic DNA Translation: AKB11687.1
KP058615 Genomic DNA Translation: AKB11688.1
KP058616 Genomic DNA Translation: AKB11689.1
KP058617 Genomic DNA Translation: AKB11690.1
KP058618 Genomic DNA Translation: AKB11691.1
KP058660 mRNA Translation: AKB11693.1
MG204208 mRNA Translation: AZQ19206.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JX986688 Genomic DNA Translation: AFZ78625.1
KP058580 Genomic DNA Translation: AKB11653.1
KP058581 Genomic DNA Translation: AKB11654.1
KP058582 Genomic DNA Translation: AKB11655.1
KP058583 Genomic DNA Translation: AKB11656.1
KP058584 Genomic DNA Translation: AKB11657.1
KP058586 Genomic DNA Translation: AKB11659.1
KP058587 Genomic DNA Translation: AKB11660.1
KP058588 Genomic DNA Translation: AKB11661.1
KP058589 Genomic DNA Translation: AKB11662.1
KP058590 Genomic DNA Translation: AKB11663.1
KP058591 Genomic DNA Translation: AKB11664.1
KP058592 Genomic DNA Translation: AKB11665.1
KP058593 Genomic DNA Translation: AKB11666.1
KP058594 Genomic DNA Translation: AKB11667.1
KP058595 Genomic DNA Translation: AKB11668.1
KP058596 Genomic DNA Translation: AKB11669.1
KP058597 Genomic DNA Translation: AKB11670.1
KP058598 Genomic DNA Translation: AKB11671.1
KP058599 Genomic DNA Translation: AKB11672.1
KP058600 Genomic DNA Translation: AKB11673.1
KP058601 Genomic DNA Translation: AKB11674.1
KP058602 Genomic DNA Translation: AKB11675.1
KP058603 Genomic DNA Translation: AKB11676.1
KP058604 Genomic DNA Translation: AKB11677.1
KP058605 Genomic DNA Translation: AKB11678.1
KP058607 Genomic DNA Translation: AKB11680.1
KP058608 Genomic DNA Translation: AKB11681.1
KP058609 Genomic DNA Translation: AKB11682.1
KP058610 Genomic DNA Translation: AKB11683.1
KP058611 Genomic DNA Translation: AKB11684.1
KP058612 Genomic DNA Translation: AKB11685.1
KP058613 Genomic DNA Translation: AKB11686.1
KP058614 Genomic DNA Translation: AKB11687.1
KP058615 Genomic DNA Translation: AKB11688.1
KP058616 Genomic DNA Translation: AKB11689.1
KP058617 Genomic DNA Translation: AKB11690.1
KP058618 Genomic DNA Translation: AKB11691.1
KP058660 mRNA Translation: AKB11693.1
MG204208 mRNA Translation: AZQ19206.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Family and domain databases

CDDicd00086 homeodomain, 1 hit
InterProiView protein in InterPro
IPR005539 ELK_dom
IPR009057 Homeobox-like_sf
IPR017970 Homeobox_CS
IPR001356 Homeobox_dom
IPR008422 Homeobox_KN_domain
IPR005540 KNOX1
IPR005541 KNOX2
PfamiView protein in Pfam
PF03789 ELK, 1 hit
PF05920 Homeobox_KN, 1 hit
PF03790 KNOX1, 1 hit
PF03791 KNOX2, 1 hit
SMARTiView protein in SMART
SM01188 ELK, 1 hit
SM00389 HOX, 1 hit
SM01255 KNOX1, 1 hit
SM01256 KNOX2, 1 hit
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS51213 ELK, 1 hit
PS00027 HOMEOBOX_1, 1 hit
PS50071 HOMEOBOX_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiL0AUU4_POPTO
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: L0AUU4
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 6, 2013
Last sequence update: March 6, 2013
Last modified: December 11, 2019
This is version 40 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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