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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Caenorhabditis japonica
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiCaenorhabditis japonicaImported
Taxonomic identifieri281687 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000005237 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei110 – 133HelicalSequence analysisAdd BLAST24
Transmembranei169 – 192HelicalSequence analysisAdd BLAST24
Transmembranei439 – 456HelicalSequence analysisAdd BLAST18

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 106Neur_chan_LBDInterPro annotationAdd BLAST104
Domaini114 – 455Neur_chan_membInterPro annotationAdd BLAST342

Sequence similaritiesi

Belongs to the ligand-gated ion channel (TC 1.A.9) family. [View classification]SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3645 Eukaryota
ENOG410XQGR LUCA

Family and domain databases

Gene3Di2.70.170.10, 1 hit
InterProiView protein in InterPro
IPR006202 Neur_chan_lig-bd
IPR036734 Neur_chan_lig-bd_sf
IPR006201 Neur_channel
IPR036719 Neuro-gated_channel_TM_sf
IPR006029 Neurotrans-gated_channel_TM
IPR018000 Neurotransmitter_ion_chnl_CS
PANTHERiPTHR18945 PTHR18945, 1 hit
PfamiView protein in Pfam
PF02931 Neur_chan_LBD, 1 hit
PF02932 Neur_chan_memb, 1 hit
SUPFAMiSSF63712 SSF63712, 1 hit
SSF90112 SSF90112, 1 hit
PROSITEiView protein in PROSITE
PS00236 NEUROTR_ION_CHANNEL, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

K7GWT4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSTDVIVDYL GNIHWPLSAI FTSSCPLDVK HYPFDRQTCI LKYASWAYDG
60 70 80 90 100
TKIDLLLKSE QGDITNYITN TEWSLIGIRA EKNQVIYSCC PEPYPFIDVH
110 120 130 140 150
VTIERRAMFY VFNLILPCVL ISLIALMGFY MPTDSGEKVT LGITSLLSTT
160 170 180 190 200
VFLMLVAEGM PPTSEALPLI GIYYGVTIML VALATAMTVF TVNIHHNGVH
210 220 230 240 250
GYPVPPFLQV FAFRYLSKLL FVRIEPYHSI AHHVRHMYQK EHPNECKLTA
260 270 280 290 300
GLHYHRLADF DAKRQEQLKQ QQMQRQYDLQ RDTSNLSVIS SNVHCNQDDR
310 320 330 340 350
LLRQNSRYNT QDKAFRNSLS AKTGSPPVKK KVSFSSLNSH ETPVDSPIYG
360 370 380 390 400
RKLRRNSLTN GGHNCHVDGE KVPKVSLETD NASCSNEPLV VDEFEREFLR
410 420 430 440 450
VMSMVHGIIE RNEMRVAERD KRDAIALEWQ QVAMVLDRFL LVVFLIGTSM
460
STFVILNQRN LFE
Length:463
Mass (Da):52,918
Last modified:January 9, 2013 - v1
Checksum:iC66A86C24E5ABD86
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
K7GWT5K7GWT5_CAEJA
Uncharacterized protein
467Annotation score:

Genome annotation databases

EnsemblMetazoaiCJA04023a; CJA04023a; WBGene00123227

Similar proteinsi

Cross-referencesi

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCJA04023a; CJA04023a; WBGene00123227

Phylogenomic databases

eggNOGiKOG3645 Eukaryota
ENOG410XQGR LUCA

Family and domain databases

Gene3Di2.70.170.10, 1 hit
InterProiView protein in InterPro
IPR006202 Neur_chan_lig-bd
IPR036734 Neur_chan_lig-bd_sf
IPR006201 Neur_channel
IPR036719 Neuro-gated_channel_TM_sf
IPR006029 Neurotrans-gated_channel_TM
IPR018000 Neurotransmitter_ion_chnl_CS
PANTHERiPTHR18945 PTHR18945, 1 hit
PfamiView protein in Pfam
PF02931 Neur_chan_LBD, 1 hit
PF02932 Neur_chan_memb, 1 hit
SUPFAMiSSF63712 SSF63712, 1 hit
SSF90112 SSF90112, 1 hit
PROSITEiView protein in PROSITE
PS00236 NEUROTR_ION_CHANNEL, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiK7GWT4_CAEJA
AccessioniPrimary (citable) accession number: K7GWT4
Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: November 7, 2018
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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