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Protein
Submitted name:

Uncharacterized protein

Gene

THOC6

Organism
Pelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:THOC6Imported
OrganismiPelodiscus sinensis (Chinese softshell turtle) (Trionyx sinensis)Imported
Taxonomic identifieri13735 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaTestudinesCryptodiraTrionychiaTrionychidaePelodiscus
Proteomesi
  • UP000007267 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi13735.ENSPSIP00000005376

Structurei

3D structure databases

ProteinModelPortaliK7FBG6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini109 – 192WD_REPEATS_REGIONInterPro annotationAdd BLAST84
Repeati151 – 192WDPROSITE-ProRule annotationAdd BLAST42

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0649 Eukaryota
ENOG410XTCD LUCA
GeneTreeiENSGT00390000015278
KOiK13175
OMAiDWLLCGG
OrthoDBiEOG091G0JN9
TreeFamiTF324760

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 1 hit
SMARTiView protein in SMART
SM00320 WD40, 4 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

K7FBG6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MDIQRALELL HMTVFSQSVS PCGKYLAAGN NYGEIAVFSL SAALSSEAKE
60 70 80 90 100
ESKKPVVSFT AHDGPVYAMV STERQLLSAG NGEVKAWNWS DIVKKGCKEA
110 120 130 140 150
WSRRPPYRSS LEVPEINSLQ LNPKDNSLLL AGGDCSVHAM DLESGTFTHE
160 170 180 190 200
FRGHSDYVHC LALRDQYQEC LSGSEDGTVR MWDLRTGAQV QVIEVHKYEE
210 220 230 240 250
CSRPQNGKWI RCLATDCDWM VCGGGPALTL WHLRSVTPTT VFPLPHCQQH
260 270 280 290 300
VMFYQDLILS AGHSPAINHL QISGELRAQI PCTPRSVHSL CVNQRSPEHK
310
VAGCSLEGGG RMARGRGAE
Length:319
Mass (Da):35,151
Last modified:January 9, 2013 - v1
Checksum:iB505C835E21612F8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGCU01040635 Genomic DNA No translation available.
AGCU01040636 Genomic DNA No translation available.
RefSeqiXP_006116293.1, XM_006116231.2

Genome annotation databases

EnsembliENSPSIT00000005407; ENSPSIP00000005376; ENSPSIG00000005010
GeneIDi102446335
KEGGipss:102446335

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGCU01040635 Genomic DNA No translation available.
AGCU01040636 Genomic DNA No translation available.
RefSeqiXP_006116293.1, XM_006116231.2

3D structure databases

ProteinModelPortaliK7FBG6
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi13735.ENSPSIP00000005376

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPSIT00000005407; ENSPSIP00000005376; ENSPSIG00000005010
GeneIDi102446335
KEGGipss:102446335

Organism-specific databases

CTDi79228

Phylogenomic databases

eggNOGiKOG0649 Eukaryota
ENOG410XTCD LUCA
GeneTreeiENSGT00390000015278
KOiK13175
OMAiDWLLCGG
OrthoDBiEOG091G0JN9
TreeFamiTF324760

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 1 hit
SMARTiView protein in SMART
SM00320 WD40, 4 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiK7FBG6_PELSI
AccessioniPrimary (citable) accession number: K7FBG6
Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: October 10, 2018
This is version 39 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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