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Protein
Submitted name:

Polypyrimidine tract-binding protein 1

Gene

PTBP1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Polypyrimidine tract-binding protein 1Imported
Gene namesi
Name:PTBP1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 19

Organism-specific databases

EuPathDBiHostDB:ENSG00000011304.17
HGNCiHGNC:9583 PTBP1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000011304

PTM / Processingi

Proteomic databases

PeptideAtlasiK7ELW5
PRIDEiK7ELW5

Expressioni

Gene expression databases

BgeeiENSG00000011304 Expressed in 241 organ(s), highest expression level in embryo
ExpressionAtlasiK7ELW5 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliK7ELW5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG1190 Eukaryota
ENOG410XPMZ LUCA
GeneTreeiENSGT00550000074508

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
SUPFAMiSSF54928 SSF54928, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 11 potential isoforms that are computationally mapped.Show allAlign All

K7ELW5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XFSTCVTNGP FIMSSNSASA ANGNDSKKFK GDSRSAGVPS RVIHIRKLPI
60 70 80 90 100
DVTEGEVISL GLPFGKVTNL LMLKGKNQGL TKDYGNSPLH RFKKPGSKNF

QNIFP
Length:105
Mass (Da):11,320
Last modified:October 29, 2014 - v2
Checksum:iF0CA8564CC3394E4
GO

Computationally mapped potential isoform sequencesi

There are 11 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P26599PTBP1_HUMAN
Polypyrimidine tract-binding protei...
PTBP1 PTB
531Annotation score:
A6NLN1A6NLN1_HUMAN
Polypyrimidine tract binding protei...
PTBP1 hCG_20560
527Annotation score:
A0A0D9SF20A0A0D9SF20_HUMAN
Polypyrimidine tract binding protei...
PTBP1 hCG_20560
197Annotation score:
A0A0U1RRM4A0A0U1RRM4_HUMAN
Polypyrimidine tract-binding protei...
PTBP1
588Annotation score:
K7EKJ7K7EKJ7_HUMAN
Polypyrimidine tract-binding protei...
PTBP1
237Annotation score:
K7EK45K7EK45_HUMAN
Polypyrimidine tract-binding protei...
PTBP1
256Annotation score:
A0A087WU68A0A087WU68_HUMAN
Polypyrimidine tract-binding protei...
PTBP1
227Annotation score:
K7ES59K7ES59_HUMAN
Polypyrimidine tract-binding protei...
PTBP1
149Annotation score:
A0A087WUW5A0A087WUW5_HUMAN
Polypyrimidine tract-binding protei...
PTBP1
81Annotation score:
K7EKX4K7EKX4_HUMAN
Polypyrimidine tract-binding protei...
PTBP1
56Annotation score:
There is more potential isoformShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei105Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006273 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000585535; ENSP00000466250; ENSG00000011304
UCSCiuc060qrd.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006273 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliK7ELW5
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiK7ELW5
PRIDEiK7ELW5

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000585535; ENSP00000466250; ENSG00000011304
UCSCiuc060qrd.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000011304.17
HGNCiHGNC:9583 PTBP1
OpenTargetsiENSG00000011304
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1190 Eukaryota
ENOG410XPMZ LUCA
GeneTreeiENSGT00550000074508

Miscellaneous databases

ChiTaRSiPTBP1 human

Gene expression databases

BgeeiENSG00000011304 Expressed in 241 organ(s), highest expression level in embryo
ExpressionAtlasiK7ELW5 baseline and differential

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
SUPFAMiSSF54928 SSF54928, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiK7ELW5_HUMAN
AccessioniPrimary (citable) accession number: K7ELW5
Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: October 29, 2014
Last modified: September 12, 2018
This is version 45 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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