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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Pseudomonas sp. Chol1
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminoacyl-tRNA synthetaseUniRule annotation, Ligase
Biological processProtein biosynthesisUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotationImported
ORF Names:C211_09019Imported, C211_09488Imported
OrganismiPseudomonas sp. Chol1Imported
Taxonomic identifieri440512 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000008490 Componenti: Unassembled WGS sequence

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer.UniRule annotation

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 91Arg_tRNA_synt_NInterPro annotationAdd BLAST89
Domaini463 – 579DALR_1InterPro annotationAdd BLAST117

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi127 – 137"HIGH" regionUniRule annotationAdd BLAST11

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

OrthoDBiPOG091H01RF

Family and domain databases

CDDicd00671 ArgRS_core, 1 hit
Gene3Di3.30.1360.70, 1 hit
3.40.50.620, 1 hit
HAMAPiMF_00123 Arg_tRNA_synth, 1 hit
InterProiView protein in InterPro
IPR001412 aa-tRNA-synth_I_CS
IPR001278 Arg-tRNA-ligase
IPR005148 Arg-tRNA-synth_N
IPR036695 Arg-tRNA-synth_N_sf
IPR035684 ArgRS_core
IPR008909 DALR_anticod-bd
IPR014729 Rossmann-like_a/b/a_fold
IPR009080 tRNAsynth_Ia_anticodon-bd
PANTHERiPTHR11956 PTHR11956, 1 hit
PfamiView protein in Pfam
PF03485 Arg_tRNA_synt_N, 1 hit
PF05746 DALR_1, 1 hit
PF00750 tRNA-synt_1d, 1 hit
PRINTSiPR01038 TRNASYNTHARG
SMARTiView protein in SMART
SM01016 Arg_tRNA_synt_N, 1 hit
SM00836 DALR_1, 1 hit
SUPFAMiSSF47323 SSF47323, 1 hit
SSF55190 SSF55190, 1 hit
TIGRFAMsiTIGR00456 argS, 1 hit
PROSITEiView protein in PROSITE
PS00178 AA_TRNA_LIGASE_I, 1 hit

Sequencei

Sequence statusi: Complete.

K5YMS2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKDSIRHLIQ QALDRLTADG VLPAGLSPTI QVENTKDKSH GDFASNIAMM
60 70 80 90 100
LAKPAGLKPR ELAEKLIAAL PQDAQVSKVE IAGPGFLNFF QNTAALAERL
110 120 130 140 150
EAALADPQLA VRKVGAAQRV VIDLSSPNLA KEMHVGHLRS TIIGDAVARV
160 170 180 190 200
LTFLGDDVIR QNHVGDWGTQ FGMLLAYLEE QPAAAESELA DLEQFYRAAK
210 220 230 240 250
KRFDESAEFA DRARELVVRL QAGDAECLRL WQRFNDVSLS HCQAVYDRLG
260 270 280 290 300
VSLSPADVKG ESAYNAELPG IVEALRAKGL LTEDDGAQCV FLDEFKNAEG
310 320 330 340 350
NPLPVIVQKA GGGYLYATTD LAAMRYRSQV LHADRVLYFV DQRQALHFQM
360 370 380 390 400
AFEVARRAGF VHDGMQLEHM GFGTMNGADG RPFKTRDGGT VKLIDLLDEA
410 420 430 440 450
EQRAYSLVKE KNPELDESEL RQIARAVGIS AVKYADLSKH RTSDYRFNFE
460 470 480 490 500
LMLSFEGNTA PYLLYAYTRV ASVFRKLGKG SDEITGHIRL EAEQELALAA
510 520 530 540 550
RLAQFGEVLN NVAAKGEPHQ LCSYLYDLAG LFSSFYEHCP ILGADQPEQK
560 570
DSRLRLAALT GKTLKQGLEL LGLEPLERM
Length:579
Mass (Da):63,837
Last modified:January 9, 2013 - v1
Checksum:iEE0703C334390221
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AMSL01000061 Genomic DNA Translation: EKM96146.1
AMSL01000058 Genomic DNA Translation: EKM96272.1
RefSeqiWP_008568321.1, NZ_AMSL01000061.1

Genome annotation databases

EnsemblBacteriaiEKM96146; EKM96146; C211_09488
EKM96272; EKM96272; C211_09019
PATRICifig|440512.3.peg.1771

Similar proteinsi

Entry informationi

Entry nameiK5YMS2_9PSED
AccessioniPrimary (citable) accession number: K5YMS2
Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: March 28, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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