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Entry version 25 (07 Oct 2020)
Sequence version 1 (09 Jan 2013)
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Protein
Submitted name:

Uncharacterized protein

Gene

AF_016

Organism
Pseudomonas phage AF
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the 'correct annotation' for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the 'protein existence' evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: 'Name', 'Synonyms', 'Ordered locus names' and 'ORF names'.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:AF_016Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPseudomonas phage AFImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the 'taxonomic identifier' or 'taxid'.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri1235689 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiVirusesDuplodnaviriaHeunggongviraeUroviricotaCaudoviricetesCaudoviralesPodoviridae
<p>This subsection of the <a href="http://www.uniprot.org/help/names%5Fand%5Ftaxonomy%5Fsection">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000216 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes%5Fmanual">proteome</a> can consist of several components.<br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Genome

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family%5Fand%5Fdomains%5Fsection">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini45 – 137LPD22InterPro annotationAdd BLAST93
Domaini669 – 724LPD23InterPro annotationAdd BLAST56

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 29DisorderedSequence analysisAdd BLAST29
Regioni222 – 242DisorderedSequence analysisAdd BLAST21
Regioni918 – 946DisorderedSequence analysisAdd BLAST29

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and domains' section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili1397 – 1417Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the 'Family and Domains' section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi932 – 946PolarSequence analysisAdd BLAST15

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

Coiled coilSequence analysis

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR040738, LPD22
IPR040696, LPD23

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF18834, LPD22, 1 hit
PF18838, LPD23, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence%5Flength">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences%5Fsection">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

K4NZ44-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MIQVPELLKP VDSSAIPQPE TPPSKTTQLA DAARDFAQSQ SQDFVHSMET
60 70 80 90 100
VSNISPDAYA KATAVSRYSG VPAKVLHDNA DRMNQLLRGN QYAGIYTNYR
110 120 130 140 150
KTANALRDGN LAAVSQDDLD QLVRIEGAAS DTRFNQQSTG EKLFGAVRQQ
160 170 180 190 200
WVAQRQAGRV ADAARLNDIQ AQFDRVDLEV ARAAEAGEQP FPGGDNPTGF
210 220 230 240 250
GFDYLQATPE QRQQMRERLV GRQTEQLQRA AQDEQTLSDM PVDPGARRAA
260 270 280 290 300
ELESLGRGSL SATAEALAEN PGYAFRTSVG AAATSAEMLA AGAIAGPVAA
310 320 330 340 350
AGIGFSGEYQ SKLLDVLREA KVNPNDPKAV LRALQDDKLM ADAERRASLK
360 370 380 390 400
AAGTTAVDLV SMGLASNLLV PSRIAGRQLT RTQRELANLA VQFPVQGIGE
410 420 430 440 450
GASEAAGQFA AEGKVDAGEV LLEAVAGAGM SSLDVLAFSN RRLIEGIGDG
460 470 480 490 500
LRRARETREG QLSLDEMVDA SLSSKTRGRE ADTFGDIAKA QLADTPMETL
510 520 530 540 550
WIPAEALTRL NQDGKANLPE LMLSIPGMTE QFADASARGG SVAIKTADYL
560 570 580 590 600
RVFADYHQDL SQSIRTQADG MSPADVEAWT ADQEAQLDDL GKIVQQNSPE
610 620 630 640 650
TNAYREVVDD LVASGYRRAD AEQYASVHLS VLSNLAERTG QALEQIRQQF
660 670 680 690 700
PLTFTADQAG PQQGRRLDQF AGQTAWSADM PSLADAEQRI ADGDNAEQVR
710 720 730 740 750
RETGWSQGAD GKWRFEIDDS QAQFAPINDW LDDAEVDGVT LGEALNHPAL
760 770 780 790 800
FAAYPELAQV QIRVNPARRS GGMFVSQPGR GFVGSYIEIG DPTLYSSDSP
810 820 830 840 850
AIDVVMHEVQ HAIQVREGFA TGGSEDAMRA DKDQAMADRD YWRQVADLRR
860 870 880 890 900
EIDSLGEEAG RQAFIDTFER TPTEQQMQDA LATDLPQIEQ RAADAEQVMR
910 920 930 940 950
DIGNPETTYR RLAGEVEARN TERRRTMTAE ERQAASPEQT ADTPSDQAIV
960 970 980 990 1000
RWNGTEMNSA AVAGQRLLNQ NDNGDARGFI TFTPRGEGDR RFQISLGDKR
1010 1020 1030 1040 1050
DLSTVLHELG HYYLEVIDQI STNENAPEQI KDDVSTIRAW LGAEEGDPIT
1060 1070 1080 1090 1100
TEQHEQFARG FESYLAEGKA PSPELAGAFA RFKRWLIQIY KDLRRLNVTL
1110 1120 1130 1140 1150
TDDVRRVFDR LVATDEQITA AEQVTNALPL FADAAAAGMT EQEFVAYQNS
1160 1170 1180 1190 1200
IDLAHADARD SIEEEIVREE ERRRSKWWRE ESSRVRDEVT EEIDTLPEYA
1210 1220 1230 1240 1250
ALKALRKGQM PDGTDLTIKL NSGELAERYG AKATRKLAFT HARDGQPLDV
1260 1270 1280 1290 1300
VGPMLGYDSG DQLVKALLGA EPRSQVIKRE TDQRMLERHG PKSTGEAAER
1310 1320 1330 1340 1350
AIDATHNERR AEVLQKELRR LAQVGNRKNI TTQQILKEAS RRVMLQRKVR
1360 1370 1380 1390 1400
DIQPAEFQRA EAKAGRQSYE AFVNGDLEAA YEAKQRQLLN FYMYREARKA
1410 1420 1430 1440 1450
REQVEDITAR MLKYNKASTR ERLGKAGHDY LDQIDAVMEQ YEFRKVSLRE
1460 1470 1480 1490 1500
VDKRKSFAAW YADQLAMGNE PIVPEFVLNT SQRVNYKDLS LDQLQELDEF
1510 1520 1530 1540 1550
VANVNHLAST KNKLLANKRL KDFEEAKNNL IRAGYANLEK RTPPPVDKNT
1560 1570 1580 1590 1600
RTLLERIGDQ AGELSAALIK MEQVVEWLDG GQVDGPWSTA FFQPFVEAQG
1610 1620 1630 1640 1650
AKDQLNRDIA IKMTEIVDAY TKERGAKVMQ QKIHIQSLGQ PLTMNAILSA
1660 1670 1680 1690 1700
ALNTGNASNR KKLLDGGHNG KAWTEQQLNE ITGNLTKRDW EFVQSMWDLV
1710 1720 1730 1740 1750
EELWPSIVQL EKDLHGVPPE KVEATPVVTQ HGTFRGGYWP LVYDTSSSAY
1760 1770 1780 1790 1800
AGVQNELGNE GGLFEQGYAR ATTPKGHTKA RVDSFAAPIQ LDVEIIASHL
1810 1820 1830 1840 1850
GQVIHDLTHR KAIRDAAKII GDKQIKQMLI DTLGPAVANQ FNPWLQGVAN
1860 1870 1880 1890 1900
DMVLDSQKGI DAWTRGAERL RANLAVGFMG FSATTGLQQI LGYSQSFEYF
1910 1920 1930 1940 1950
SKVGGKRYIF QGMQEFIRHP FESIEMVNQM SSEMRFRVDN LDRDMRGVLK
1960 1970 1980 1990 2000
KISGKSDWLS FVQRLAFKHI GVIQAMVDYP TWIAGYRHGL DSGLDGEQAI
2010 2020 2030 2040 2050
AAGDRAVRLS QMAAGPKDLA AVQRKDGLMR ALTIVYSYFN LLYNRTVDIK
2060 2070 2080 2090 2100
RAFSSAKGAA DYLNVFERTM FLIAIPAVIG PLVSGQGPGE DEDWRAWASL
2110 2120 2130 2140 2150
KIATYPLLGI PLVRDLASSL ESGWAYKGAT PIGEVFNTLS KAGAAGKSAA
2160 2170 2180 2190 2200
EGKDVDTARA AGLAIDTIGY SFGLPVAQPK RTVKYLIGVA EGDIEPEGVT
2210
DWTRGVIFGP PKK
Length:2,213
Mass (Da):244,116
Last modified:January 9, 2013 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i37F408CC58D7E5FD
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
JX676771 Genomic DNA Translation: AFV50631.1

NCBI Reference Sequences

More...
RefSeqi
YP_007237191.1, NC_019923.1

Genome annotation databases

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
14296899

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
vg:14296899

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JX676771 Genomic DNA Translation: AFV50631.1
RefSeqiYP_007237191.1, NC_019923.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

GeneIDi14296899
KEGGivg:14296899

Family and domain databases

InterProiView protein in InterPro
IPR040738, LPD22
IPR040696, LPD23
PfamiView protein in Pfam
PF18834, LPD22, 1 hit
PF18838, LPD23, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the 'Entry information' section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiK4NZ44_9CAUD
<p>This subsection of the 'Entry information' section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called 'Primary (citable) accession number'.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: K4NZ44
<p>This subsection of the 'Entry information' section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification ('Last modified'). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical%5Fand%5Fisoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: January 9, 2013
Last sequence update: January 9, 2013
Last modified: October 7, 2020
This is version 25 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the 'Entry information' section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn't fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Reference proteomeImported
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