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Protein

Alpha-amylase

Gene

LOC101767641

Organism
Setaria italica (Foxtail millet) (Panicum italicum)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Cofactori

Ca2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei200NucleophileUniRule annotation1
Active sitei225Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan glucanohydrolaseUniRule annotation
Gene namesi
Name:LOC101767641Imported
Synonyms:101767641Imported
ORF Names:SETIT_013789mgImported
OrganismiSetaria italica (Foxtail millet) (Panicum italicum)Imported
Taxonomic identifieri4555 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaePanicodaePaniceaeCenchrinaeSetaria
Proteomesi
  • UP000004995 Componenti: Chromosome VI

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21UniRule annotationAdd BLAST21
ChainiPRO_501060496122 – 432Alpha-amylaseUniRule annotationAdd BLAST411

Interactioni

Protein-protein interaction databases

STRINGi4555.Si013789m

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini22 – 360AamyInterPro annotationAdd BLAST339
Domaini361 – 421Alpha-amyl_C2InterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiKOG0471 Eukaryota
COG0366 LUCA
InParanoidiK3YHS0
KOiK01176
OMAiVLNHKMG
OrthoDBiEOG093600FS

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR012850 A-amylase_bs_C
IPR013775 A-amylase_pln
IPR006046 Alpha_amylase
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF07821 Alpha-amyl_C2, 1 hit
PF00128 Alpha-amylase, 1 hit
PIRSFiPIRSF001028 Alph-amls_plant, 1 hit
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00810 Alpha-amyl_C2, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit

Sequencei

Sequence statusi: Complete.

K3YHS0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKHSSSLGLL FLLALCSLVQ AQVLFQGFNW ESCKKQGGWY NSLKAKVDDI
60 70 80 90 100
AKAGVTHVWL PPPSHSVSPQ GYMPGRLYDL DASKYGTAAE LKSLIAAFHR
110 120 130 140 150
RGIQCVADIV INHRCADKKD ARGVYCIFEG GTPDERLDWG PGMICSDDTQ
160 170 180 190 200
YSDGTGHRDT GEGFAAAPDI DHLNARVQRE LSAWLNWLKS DVGFDGWRLD
210 220 230 240 250
FAKGYSPAIA KMYVKNTRPS FVVAEIWNSL SYNGDGKPSP NQDQRRQELV
260 270 280 290 300
NWVQAVGKPA MAFDFTTKGL LQAGVQGELW RLRDSSGKAA GLIGWTPEKA
310 320 330 340 350
VTFIDNHDTG STQKLWPFPS DKVMQGYAYI LTHPGVPCIF YDHMFDWNLK
360 370 380 390 400
QEISTLTAIR ARNGIHAGSK LRILLADDDA YVAVVDEKVM VKIGTRYDVG
410 420 430
NVIPSDFHPA AHGKDYCVWE KGTLRVPAGL HL
Length:432
Mass (Da):47,862
Last modified:November 28, 2012 - v1
Checksum:i9433ECD486C2FF65
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGNK02003935 Genomic DNA No translation available.
CM003533 Genomic DNA Translation: KQL02169.1
RefSeqiXP_004973671.1, XM_004973614.1

Genome annotation databases

EnsemblPlantsiKQL02169; KQL02169; SETIT_013789mg
Si013789m; Si013789m; Si013789m.g
GeneIDi101767641
KEGGisita:101767641

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGNK02003935 Genomic DNA No translation available.
CM003533 Genomic DNA Translation: KQL02169.1
RefSeqiXP_004973671.1, XM_004973614.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4555.Si013789m

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiKQL02169; KQL02169; SETIT_013789mg
Si013789m; Si013789m; Si013789m.g
GeneIDi101767641
KEGGisita:101767641

Phylogenomic databases

eggNOGiKOG0471 Eukaryota
COG0366 LUCA
InParanoidiK3YHS0
KOiK01176
OMAiVLNHKMG
OrthoDBiEOG093600FS

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR012850 A-amylase_bs_C
IPR013775 A-amylase_pln
IPR006046 Alpha_amylase
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF07821 Alpha-amyl_C2, 1 hit
PF00128 Alpha-amylase, 1 hit
PIRSFiPIRSF001028 Alph-amls_plant, 1 hit
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00810 Alpha-amyl_C2, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiK3YHS0_SETIT
AccessioniPrimary (citable) accession number: K3YHS0
Entry historyiIntegrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: October 10, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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