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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Setaria italica (Foxtail millet) (Panicum italicum)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSetaria italica (Foxtail millet) (Panicum italicum)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4555 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaePACMAD cladePanicoideaePanicodaePaniceaeCenchrinaeSetaria

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Phylogenomic databases

Identification of Orthologs from Complete Genome Data

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OMAi
RDPAISH

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

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Gene3Di
2.130.10.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR032401 EDC4_WD40
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF16529 Ge1_WD40, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

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SMARTi
View protein in SMART
SM00320 WD40, 3 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF50978 SSF50978, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS50082 WD_REPEATS_2, 2 hits
PS50294 WD_REPEATS_REGION, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

K3XUU6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MASPSGNPNP TPSAPFELSK LFRPPPNPNH PTTAPSPTGV FPGAPGPAAG
60 70 80 90 100
PPLTGPYSYP PATPPFHRGP YLQYPNDPHG FHHPAAAAFA NANPTANPIP
110 120 130 140 150
NPGPGPNPGA RLMQLLGNTT PTHLESAASM PPSSEFSTAP AVALPASSSA
160 170 180 190 200
PPARMLSSKM PRGRLLGPGD RAVHDVDSRL PGEAEPPQLE VTPITKYTSD
210 220 230 240 250
PGLVLGRQIA VNRTYIVYGL KLGNIRVLNI NTALRSLLRG HTQVTDMAFF
260 270 280 290 300
AEDVHRLASA SVDGRVYVWK IDEGPDEENK SQITGKIEIA IQIVGDAETY
310 320 330 340 350
HPRICWHSHK QEILYVAIGN CILRIDTTKV GRGRDFHTEE PLRCPLDKLI
360 370 380 390 400
DGVNIVGKHG GDITDLSISQ WMTTRLASAS KDGTVKVWDD RRVAPLSVLK
410 420 430 440 450
PHDGQAVYSV SFLTAPERPN HINLVTAGPL NREVKIWAST NEDGWLSPSD
460 470 480 490 500
PETWKCTQTL ELVSSLENRS EEAFFNQVAV LPQASLILLA NAKKNAIYAV
510 520 530 540 550
HLEYGQDPAS TRLDYIADFT VAMPILSLTG THENQPDGEQ VVQVYCVQTM
560 570 580 590 600
AIQQYGLELS LCLPPPADNI GSGRDPAISH LNERLPEMAA LDSTATTPVD
610 620 630 640 650
SSTAVSTKPS SDSQGTAPKS KMNQAGSPVV LSRDPSGSDR DVDQSSFGRK
660 670 680 690 700
DSIGKEEPRG GHSDGMVISD PRPVLQVGGH ATHLITPSEI ISGGLTSAET
710 720 730 740 750
VASGSSQNVE AEAKHVDERK SNQTVGFEAG KENQILPEKK GRPIKPSEQT
760 770 780 790 800
VDTLSERTIV TAKYSVEDSQ PMADRSVPTL LKQSSGAEDE DAVKRATGAS
810 820 830 840 850
DGTGTDGPCT SRDLPLTSAA KEGKVMHPQP QVAGQLSPSA TTFNSTDSSH
860 870 880 890 900
EPRSNENPPI DSSLQAAAIQ GTLQQLIATY GNLQKQLSSI VSAPIAKEGK
910 920 930 940 950
RIEASLSRNM EKSIKANIDA MWARFQEENV RHEKYERERM QQMATLIATS
960 970 980 990 1000
VNKDIPVMLE KSLKKEISSL GPAVARTTAP IIEKSLSSAV SDSLQKVLGD
1010 1020 1030 1040 1050
KVANQLDKSI STKLEASVAR QIQTQFQTST KQILQDAFRS SFETSVIPAF
1060 1070 1080 1090 1100
EQSCKTIFEQ VDGSFQKGMS EHGAAIQQQV LTAHTPLAQT LKEAITSASS
1110 1120 1130 1140 1150
MNQGLNSELL DGQRKLLSLF ASGSPTSQKT GALQPSNGPV ANLPEVDAPL
1160 1170 1180 1190 1200
DPMKELGRLI AERKIDEAFT MALQRSDVSI VSWLCSQVDL QALCGAVPIP
1210 1220 1230 1240 1250
LNQGVLLALF QQLACDIAND TSRKLQWMTN VAVAIQPTDP IIAMHVRPIF
1260 1270 1280
DQVYGVLAHQ RSLPTTNASD ATNIRLIMHV ITSVLISHK
Length:1,289
Mass (Da):138,496
Last modified:November 28, 2012 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iC89AB45F50147C0F
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

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EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AGNK02002377 Genomic DNA No translation available.

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
KQL10391; KQL10391; SETIT_005703mg

Gramene; a comparative resource for plants

More...
Gramenei
KQL10391; KQL10391; SETIT_005703mg

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGNK02002377 Genomic DNA No translation available.

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiKQL10391; KQL10391; SETIT_005703mg
GrameneiKQL10391; KQL10391; SETIT_005703mg

Phylogenomic databases

OMAiRDPAISH

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR032401 EDC4_WD40
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF16529 Ge1_WD40, 1 hit
SMARTiView protein in SMART
SM00320 WD40, 3 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50082 WD_REPEATS_2, 2 hits
PS50294 WD_REPEATS_REGION, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiK3XUU6_SETIT
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: K3XUU6
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: November 7, 2018
This is version 31 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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