UniProtKB - K1R8B3 (K1R8B3_CRAGI)
Protein
Submitted name:
Putative ATP-dependent RNA helicase DHX58
Gene
CGI_10003083
Organism
Crassostrea gigas (Pacific oyster) (Crassostrea angulata)
Status
Functioni
GO - Molecular functioni
- helicase activity Source: UniProtKB-KW
Keywordsi
Molecular function | HelicaseImported, Hydrolase |
Ligand | ATP-binding, Nucleotide-binding |
Names & Taxonomyi
Protein namesi | Submitted name: Putative ATP-dependent RNA helicase DHX58Imported |
Gene namesi | ORF Names:CGI_10003083Imported |
Organismi | Crassostrea gigas (Pacific oyster) (Crassostrea angulata)Imported |
Taxonomic identifieri | 29159 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Lophotrochozoa › Mollusca › Bivalvia › Pteriomorphia › Ostreoida › Ostreoidea › Ostreidae › Crassostrea |
Proteomesi |
|
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 1 – 82 | Helicase ATP-bindingInterPro annotationAdd BLAST | 82 | |
Domaini | 209 – 376 | Helicase C-terminalInterPro annotationAdd BLAST | 168 | |
Domaini | 397 – 524 | RLR CTRInterPro annotationAdd BLAST | 128 |
Phylogenomic databases
InParanoidi | K1R8B3 |
OMAi | THREETN |
Family and domain databases
CDDi | cd00079 HELICc, 1 hit |
Gene3Di | 2.170.150.30, 1 hit |
InterProi | View protein in InterPro IPR014001 Helicase_ATP-bd IPR001650 Helicase_C IPR027417 P-loop_NTPase IPR038557 RLR_C_sf IPR021673 RLR_CTR |
Pfami | View protein in Pfam PF00271 Helicase_C, 1 hit PF11648 RIG-I_C-RD, 1 hit |
SMARTi | View protein in SMART SM00490 HELICc, 1 hit |
SUPFAMi | SSF52540 SSF52540, 1 hit |
PROSITEi | View protein in PROSITE PS51192 HELICASE_ATP_BIND_1, 1 hit PS51194 HELICASE_CTER, 1 hit PS51789 RLR_CTR, 1 hit |
i Sequence
Sequence statusi: Complete.
K1R8B3-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MLVNAMVKGD LRIESFSLII LDECHHCHGG HAFYKTMIPY HDKKLEDSEE
60 70 80 90 100
QKTLPQIVGL TASIGVGKAK SQTQAISHIK LMMANLDANA LVSVKENFAE
110 120 130 140 150
LAEKMNSPDQ YELGENMNPP YSKGNEEYTQ WLEITLLKAV AKVSDSVLSR
160 170 180 190 200
SLASDAFSFI AQNIEELQKS SKKTEIETRA NALFENARGN LEICAVDGMR
210 220 230 240 250
CEENPLLLKL KEIILDTHRE ETNMRGIVFV RTRVVADIIA SWMGETEELK
260 270 280 290 300
NIKAKKYTGA QAPGAEGGIT KNKQEETIKL FTKGDYKVIV ATTIAEEGLD
310 320 330 340 350
IKACNLVVKY DYAGNLISQI QAKGRGRAEH SRFFILASED KCVAEREWMN
360 370 380 390 400
SLKEPMMEEA MVLVQQEIQV EHEKYQMGKR ELQRLAKRQR DAALHNQSSR
410 420 430 440 450
EALEGQYVLK CLKCNEYLCL SSELRKIKSQ YGCISQDFKD HVFCKKSDKI
460 470 480 490 500
TYEDKEIKVG VGKIMCKKCR VNIGNIALYQ EIYFPLPHIK AIKIEDDMKK
510 520 530
GDHLKQWKKV EEKYFTVSPL SDEDLEKISE SGKLVEID
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | JH816918 Genomic DNA Translation: EKC37415.1 |
Genome annotation databases
EnsemblMetazoai | EKC37415; EKC37415; CGI_10003083 |
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | JH816918 Genomic DNA Translation: EKC37415.1 |
3D structure databases
ModBasei | Search... |
MobiDBi | Search... |
Protocols and materials databases
Structural Biology Knowledgebase | Search... |
Genome annotation databases
EnsemblMetazoai | EKC37415; EKC37415; CGI_10003083 |
Phylogenomic databases
InParanoidi | K1R8B3 |
OMAi | THREETN |
Family and domain databases
CDDi | cd00079 HELICc, 1 hit |
Gene3Di | 2.170.150.30, 1 hit |
InterProi | View protein in InterPro IPR014001 Helicase_ATP-bd IPR001650 Helicase_C IPR027417 P-loop_NTPase IPR038557 RLR_C_sf IPR021673 RLR_CTR |
Pfami | View protein in Pfam PF00271 Helicase_C, 1 hit PF11648 RIG-I_C-RD, 1 hit |
SMARTi | View protein in SMART SM00490 HELICc, 1 hit |
SUPFAMi | SSF52540 SSF52540, 1 hit |
PROSITEi | View protein in PROSITE PS51192 HELICASE_ATP_BIND_1, 1 hit PS51194 HELICASE_CTER, 1 hit PS51789 RLR_CTR, 1 hit |
ProtoNeti | Search... |
Entry informationi
Entry namei | K1R8B3_CRAGI | |
Accessioni | K1R8B3Primary (citable) accession number: K1R8B3 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | November 28, 2012 |
Last sequence update: | November 28, 2012 | |
Last modified: | January 16, 2019 | |
This is version 20 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |