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Protein
Submitted name:

Brachyury protein

Gene

CGI_10018059

Organism
Crassostrea gigas (Pacific oyster) (Crassostrea angulata)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Brachyury proteinImported
Gene namesi
ORF Names:CGI_10018059Imported
OrganismiCrassostrea gigas (Pacific oyster) (Crassostrea angulata)Imported
Taxonomic identifieri29159 [NCBI]
Taxonomic lineageiEukaryotaMetazoaLophotrochozoaMolluscaBivalviaPteriomorphiaOstreoidaOstreoideaOstreidaeCrassostrea
Proteomesi
  • UP000005408 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Family & Domainsi

Phylogenomic databases

InParanoidiK1QIN9
OrthoDBiEOG091G05OC

Family and domain databases

CDDicd00182 TBOX, 1 hit
Gene3Di2.60.40.820, 1 hit
InterProiView protein in InterPro
IPR008967 p53-like_TF_DNA-bd
IPR036960 T-box_sf
IPR002070 TF_Brachyury
IPR001699 TF_T-box
IPR018186 TF_T-box_CS
PANTHERiPTHR11267 PTHR11267, 1 hit
PfamiView protein in Pfam
PF00907 T-box, 1 hit
PRINTSiPR00938 BRACHYURY
PR00937 TBOX
SMARTiView protein in SMART
SM00425 TBOX, 1 hit
SUPFAMiSSF49417 SSF49417, 1 hit
PROSITEiView protein in PROSITE
PS01283 TBOX_1, 1 hit
PS01264 TBOX_2, 1 hit
PS50252 TBOX_3, 1 hit

Sequencei

Sequence statusi: Complete.

K1QIN9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLDSATKCDF QPFSVKSEIG TNRGTQEKSE MKSTQLNVSH LLSAVDSEMT
60 70 80 90 100
VGSEKGDPTE RQLKVNLEDK ELWGKFKEFT NEMIVTKNGR QVFIRGRRRM
110 120 130 140 150
FPVFKVSISG LDPNSMYTLL LDFVQVDTHR WKYVNGDWVA GGKAEPAAPN
160 170 180 190 200
CVYIHPDSPN FGAHWMKETV SFSKVKLTNK LNGGGQIMLN SLHKYEPRLH
210 220 230 240 250
LVKVGANSQK KRISSFSFPE TQFIAVTAYQ NEEITALKIK HNPFAKAFLD
260 270 280 290 300
AKERPDGRDL GDDGLDNQQR SLSHLASTWY IPPGGHALVP PPAHQFPNAL
310 320 330 340 350
NLSSPHCDRL SLRNAGFSRD VTSNIPMLNI PDNWMTPTNP GMLQSNTPAP
360 370 380 390 400
QSQYSMWMGN HMGNIPTNQN CAMPYLRSPN PYPFTSSNTS ISSVPNVTVS
410 420 430 440
NPAASSSFDT SKFESCDISS FAPNRDVLRT SAWSPLTPPP I
Length:441
Mass (Da):49,051
Last modified:November 28, 2012 - v1
Checksum:iA2DD432368A09C56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH817502 Genomic DNA Translation: EKC28765.1

Genome annotation databases

EnsemblMetazoaiEKC28765; EKC28765; CGI_10018059

Similar proteinsi

Entry informationi

Entry nameiK1QIN9_CRAGI
AccessioniPrimary (citable) accession number: K1QIN9
Entry historyiIntegrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: January 31, 2018
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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