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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Mycolicibacterium vaccae ATCC 25954
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotationSAAS annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotationSAAS annotation
Gene namesi
Name:rplMUniRule annotationImported
ORF Names:MVAC_04227Imported
OrganismiMycolicibacterium vaccae ATCC 25954Imported
Taxonomic identifieri1194972 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycolicibacterium
Proteomesi
  • UP000006072 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotationSAAS annotation

Phylogenomic databases

OrthoDBiPOG091H013T

Family and domain databases

CDDicd00392 Ribosomal_L13, 1 hit
Gene3Di3.90.1180.10, 1 hit
HAMAPiMF_01366 Ribosomal_L13, 1 hit
InterProiView protein in InterPro
IPR005822 Ribosomal_L13
IPR005823 Ribosomal_L13_bac-type
IPR036899 Ribosomal_L13_sf
PANTHERiPTHR11545 PTHR11545, 1 hit
PfamiView protein in Pfam
PF00572 Ribosomal_L13, 1 hit
PIRSFiPIRSF002181 Ribosomal_L13, 1 hit
SUPFAMiSSF52161 SSF52161, 1 hit
TIGRFAMsiTIGR01066 rplM_bact, 1 hit

Sequencei

Sequence statusi: Complete.

K0V2X7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTYTPKAGD TTRSWYVIDA TDVVLGRLAV EAAKLLRGKH KPTFTPNVDG
60 70 80 90 100
GDFVIVINAD KIAVSGDKLT KKFAYRHSGY PGGLRKRSIG ELLQKHPTRV
110 120 130 140
VENAITGMLP HNKLGRQIQK KLKVYAGPDH PHAAQQPAVF EIKQVAQ
Length:147
Mass (Da):16,163
Last modified:November 28, 2012 - v1
Checksum:iBC67164C6DE04C04
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ALQA01000006 Genomic DNA Translation: EJZ11750.1
RefSeqiWP_003929223.1, NZ_JH814686.1

Genome annotation databases

EnsemblBacteriaiEJZ11750; EJZ11750; MVAC_04227
PATRICifig|1194972.3.peg.853

Similar proteinsi

Entry informationi

Entry nameiK0V2X7_MYCVA
AccessioniPrimary (citable) accession number: K0V2X7
Entry historyiIntegrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: July 18, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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