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Protein
Submitted name:

CCCH-type zinc finger protein

Gene

Ehd4

Organism
Oryza sativa subsp. japonica (Rice)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri807 – 832C3H1-typePROSITE-ProRule annotationAdd BLAST26

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
CCCH-type zinc finger proteinImported
Gene namesi
Name:Ehd4Imported
OrganismiOryza sativa subsp. japonica (Rice)Imported
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa

Expressioni

Gene expression databases

ExpressionAtlasiJ9R5R9 differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini807 – 832C3H1-typeInterPro annotationAdd BLAST26

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri807 – 832C3H1-typePROSITE-ProRule annotationAdd BLAST26

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG410JXK5 Eukaryota
ENOG41103WD LUCA

Family and domain databases

InterProiView protein in InterPro
IPR000571 Znf_CCCH
IPR036855 Znf_CCCH_sf
PfamiView protein in Pfam
PF00642 zf-CCCH, 1 hit
SUPFAMiSSF90229 SSF90229, 1 hit
PROSITEiView protein in PROSITE
PS50103 ZF_C3H1, 1 hit

Sequencei

Sequence statusi: Complete.

J9R5R9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPQTSSSAHS NVESHHDHYP SWSQVQHDPK NSLQAGSGKD LNSRYDIAQK
60 70 80 90 100
LPSQRITRDV PSPVFAWSPS ESRTASSQHE GSCLSSTTNL CTHDELHSSI
110 120 130 140 150
ASAKAKSFAP ATPVEDRGSS SPSGMLSLSE RAPICSPQSA PSASASDTCK
160 170 180 190 200
MEENMNQQKT LEADISNTSV NQSPQSKILP ESSPDNQDAE HEYRSPPPIS
210 220 230 240 250
ESKELSPQSR TTPGSSPDNQ DTEREYPSPP PISGSKEISP QSRTILESSP
260 270 280 290 300
DNQDNGHEYP SPPPIPESIE LSPHSKALPE SSPDNQDIEP ECPSPPQIPE
310 320 330 340 350
SKELSRQSKI LPESSPGNQD IEPECPSPPQ IPESKELSQQ SKILPESSPD
360 370 380 390 400
NHDIKCEYSS PTPIPESKEL SLQSKILPES SSDNQDIKCE DPSPTPISKS
410 420 430 440 450
KEVSPQSKIL SESYLDNQDV ERECPSSILI TESKELAVDL PGSISLAPEK
460 470 480 490 500
TASTDVGENS SLAFIFPKST LAGDDALKSV FDMAKAHLEC EDSKVKEELY
510 520 530 540 550
VESTVVIRDD MVVNPASGVE SIDMSENLLE SLMEQSCGTF YMDGTTALEG
560 570 580 590 600
FLSGSTKEEP QCSSPIALST CSSPIALSPW GEHGYYQGDS VGSSLWGVQD
610 620 630 640 650
DDPIGNIWPL SSQAPALQYS SAGSTAHFID EATVTHGNNG VVLSSTPGEE
660 670 680 690 700
VGLPNSGVCT DWGLVEQVNP ETNDASVSMI DKNSGLVDSQ PSANDGSDVG
710 720 730 740 750
TARNTNHNTN LSLNHETAVP LSRSSGEASR KHGFITDLNV ATSEEALGNT
760 770 780 790 800
KNWNPYAGNA NRGSQRNHHR DRYSQISESW LLSSNYSRSR SDGFGTGGSS
810 820 830
RSTPRGQTQR GICKFHENGY CRKGASCNYL HP
Length:832
Mass (Da):89,491
Last modified:November 28, 2012 - v1
Checksum:iEA5B58A642315ED3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JQ828863 mRNA Translation: AFR42386.1
UniGeneiOs.9553

Genome annotation databases

EnsemblPlantsiOs03t0112700-02; Os03t0112700-02; Os03g0112700
GrameneiOs03t0112700-02; Os03t0112700-02; Os03g0112700

Similar proteinsi

Entry informationi

Entry nameiJ9R5R9_ORYSJ
AccessioniPrimary (citable) accession number: J9R5R9
Entry historyiIntegrated into UniProtKB/TrEMBL: November 28, 2012
Last sequence update: November 28, 2012
Last modified: May 23, 2018
This is version 27 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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