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Protein
Submitted name:

Limb region 1 protein

Gene

Lmbr1

Organism
Mus musculus (Mouse)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Limb region 1 proteinImported
Gene namesi
Name:Lmbr1Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 5

Organism-specific databases

MGIiMGI:1861746 Lmbr1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei20 – 40HelicalSequence analysisAdd BLAST21
Transmembranei61 – 83HelicalSequence analysisAdd BLAST23
Transmembranei95 – 111HelicalSequence analysisAdd BLAST17
Transmembranei123 – 144HelicalSequence analysisAdd BLAST22
Transmembranei164 – 185HelicalSequence analysisAdd BLAST22
Transmembranei264 – 294HelicalSequence analysisAdd BLAST31
Transmembranei314 – 339HelicalSequence analysisAdd BLAST26
Transmembranei359 – 376HelicalSequence analysisAdd BLAST18
Transmembranei396 – 419HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

MaxQBiJ3QM78
PRIDEiJ3QM78

Expressioni

Gene expression databases

BgeeiENSMUSG00000010721
ExpressionAtlasiJ3QM78 baseline and differential

Structurei

3D structure databases

SMRiJ3QM78
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili234 – 257Sequence analysisAdd BLAST24

Sequence similaritiesi

Belongs to the LIMR family.SAAS annotation

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00390000007809

Family and domain databases

InterProiView protein in InterPro
IPR008075 LIMR
IPR006876 LMBR1-like_membr_prot
PANTHERiPTHR12625 PTHR12625, 2 hits
PfamiView protein in Pfam
PF04791 LMBR1, 3 hits
PRINTSiPR01692 LIPOCALINIMR

Sequencei

Sequence statusi: Complete.

J3QM78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGQDEVSAR EQHFHSQVRE STICFLLFAI LYIVSYFIII RYKRKSDEQE
60 70 80 90 100
DEDAVVNRIS LFLSTFTLAV SAGAVLLLPF SIISNEILLA FPHNYYIQWL
110 120 130 140 150
NGSLIHGYAG MKGGIRARIL ETLVMLLLLA LLILGMVWVA SALIDSDAAS
160 170 180 190 200
MESLYDLWEF YLPYLYSCIS LMGCLLLLLC TPVGLSRMFT VMGQLLVKPA
210 220 230 240 250
ILEDLDEQIY MITLEEEALQ RRLHGLSSSV EYNVMELEQE LENVKILKTK
260 270 280 290 300
LERRKKASAW ERNLVYPAVM VLLLIETSIS VLLVACNILC LLVDETAMPK
310 320 330 340 350
GTRGPGIGSA SLSTFGFVGA ALEIILIFYL MVSSVVGFYS LRFFGNFTPK
360 370 380 390 400
KDDTTMTKII GNCVSILVLS SALPVMSRTL GITRFDLLGD FGRFNWLGNF
410 420 430 440 450
YIVLSYNLLF AIMTTLCLIR KFTSAVREEL FKALGLHKLH LSDTSRDSET
460
TKPSANGHQK AL
Length:462
Mass (Da):51,839
Last modified:October 3, 2012 - v1
Checksum:i7C7BB73028642428
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC159298 Genomic DNA No translation available.
AC171500 Genomic DNA No translation available.
AC175116 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSMUST00000179191; ENSMUSP00000136160; ENSMUSG00000010721

Similar proteinsi

Entry informationi

Entry nameiJ3QM78_MOUSE
AccessioniPrimary (citable) accession number: J3QM78
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: May 23, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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