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Protein
Submitted name:

Secreted and transmembrane protein 1

Gene

SECTM1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Secreted and transmembrane protein 1Imported
Gene namesi
Name:SECTM1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 17

Organism-specific databases

EuPathDBiHostDB:ENSG00000141574.7
HGNCiHGNC:10707 SECTM1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000141574

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 28Sequence analysisAdd BLAST28
ChainiPRO_500377729429 – 170Sequence analysisAdd BLAST142

Proteomic databases

PeptideAtlasiJ3QKK2
PRIDEiJ3QKK2

Expressioni

Gene expression databases

BgeeiENSG00000141574 Expressed in 181 organ(s), highest expression level in blood
ExpressionAtlasiJ3QKK2 baseline and differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliJ3QKK2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

GeneTreeiENSGT00530000064499
OMAiWDRPICT

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR033231 SECTM1
PANTHERiPTHR15123 PTHR15123, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 7 potential isoforms that are computationally mapped.Show allAlign All

J3QKK2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MQTCPLAFPG HVSQALGTLL FLAASLSAQN EGWDSPICTE GVVSVSWGEN
60 70 80 90 100
TVMSCNISNA FSHVNIKLRA HGQESAIFNE VAPGYFSRDG WQLQVQGGVA
110 120 130 140 150
QLVIKGARDS HAGLYMWHLV GHQRNNRQVT LEVSEPRGLK DRASAQLLGP
160 170
GTSRGAEPQS APDTGFWPVP
Length:170
Mass (Da):18,265
Last modified:October 3, 2012 - v1
Checksum:iECD2EB446AD33771
GO

Computationally mapped potential isoform sequencesi

There are 7 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8WVN6SCTM1_HUMAN
Secreted and transmembrane protein ...
SECTM1 K12
248Annotation score:
J3KTR4J3KTR4_HUMAN
Secreted and transmembrane protein ...
SECTM1
178Annotation score:
J3QQU6J3QQU6_HUMAN
Secreted and transmembrane protein ...
SECTM1
149Annotation score:
J3KSN0J3KSN0_HUMAN
Secreted and transmembrane protein ...
SECTM1
146Annotation score:
J3KS40J3KS40_HUMAN
Secreted and transmembrane protein ...
SECTM1
85Annotation score:
J3QRU5J3QRU5_HUMAN
Secreted and transmembrane protein ...
SECTM1
44Annotation score:
J3QR99J3QR99_HUMAN
Secreted and transmembrane protein ...
SECTM1
43Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei170Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC132872 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000582563; ENSP00000463120; ENSG00000141574
UCSCiuc060lyx.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC132872 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliJ3QKK2
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiJ3QKK2
PRIDEiJ3QKK2

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000582563; ENSP00000463120; ENSG00000141574
UCSCiuc060lyx.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000141574.7
HGNCiHGNC:10707 SECTM1
OpenTargetsiENSG00000141574
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00530000064499
OMAiWDRPICT

Miscellaneous databases

ChiTaRSiSECTM1 human

Gene expression databases

BgeeiENSG00000141574 Expressed in 181 organ(s), highest expression level in blood
ExpressionAtlasiJ3QKK2 baseline and differential

Family and domain databases

Gene3Di2.60.40.10, 1 hit
InterProiView protein in InterPro
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR033231 SECTM1
PANTHERiPTHR15123 PTHR15123, 1 hit
SUPFAMiSSF48726 SSF48726, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiJ3QKK2_HUMAN
AccessioniPrimary (citable) accession number: J3QKK2
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: November 7, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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