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Protein

Alpha-amylase

Gene

102709669

Organism
Oryza brachyantha
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Cofactori

Ca2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei204NucleophileUniRule annotation1
Active sitei229Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan glucanohydrolaseUniRule annotation
Gene namesi
Name:102709669Imported
OrganismiOryza brachyanthaImported
Taxonomic identifieri4533 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000006038 Componenti: Chromosome 8

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25UniRule annotationAdd BLAST25
ChainiPRO_501060552926 – 436Alpha-amylaseUniRule annotationAdd BLAST411

Interactioni

Protein-protein interaction databases

STRINGi4533.OB08G25000.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 364AamyInterPro annotationAdd BLAST339
Domaini365 – 425Alpha-amyl_C2InterPro annotationAdd BLAST61

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiKOG0471 Eukaryota
COG0366 LUCA
KOiK01176
OMAiANIMFND
OrthoDBiEOG093600FS

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR012850 A-amylase_bs_C
IPR013775 A-amylase_pln
IPR006046 Alpha_amylase
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF07821 Alpha-amyl_C2, 1 hit
PF00128 Alpha-amylase, 1 hit
PIRSFiPIRSF001028 Alph-amls_plant, 1 hit
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00810 Alpha-amyl_C2, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit

Sequencei

Sequence statusi: Complete.

J3MTR9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKHSVTVCC ALVAVLCMAS SLAQAQVLFQ GFNWESWRMQ GGWYNFLHEK
60 70 80 90 100
VEEIASTGVT HVWLPPPSHS VSPQGYMPGR LYDLDASKYG TEAELRSLIE
110 120 130 140 150
AFHEKNVECL ADIVINHRCA DYKDSRGVYC VFEGGTPDGR LDWGPDMICS
160 170 180 190 200
DDTQYSNGRG HRDTGAGFGA APDIDHLNPR VQRELTDWLN WLKADLGFDG
210 220 230 240 250
WRLDFAKGYS APIARVYVDN TNPTFVVGEI WSSLIYNGDG KPSTNQDADR
260 270 280 290 300
QELVNWVDGV GKPATAFDFT TKGILQAAVQ GELWRLHDGN GKAPGLMGWM
310 320 330 340 350
PDQAVTFVDN HDTGSTQSLW PFPSDKVMQG YAYILTHPGI PCIFYDHVFD
360 370 380 390 400
WNLQHEIATL AAIRSRNGIH PESTLDILKA EGDIYVAMID GRVITKLGPR
410 420 430
YDAGGIIPSD FHVVAHGNDY CVWEKHSLRV PAGRRP
Length:436
Mass (Da):48,445
Last modified:October 3, 2012 - v1
Checksum:i68CA6BE351F1470D
GO

Sequence databases

RefSeqiXP_006659493.1, XM_006659430.1

Genome annotation databases

EnsemblPlantsiOB08G25000.1; OB08G25000.1; OB08G25000
GeneIDi102709669
GrameneiOB08G25000.1; OB08G25000.1; OB08G25000
KEGGiobr:102709669

Similar proteinsi

Entry informationi

Entry nameiJ3MTR9_ORYBR
AccessioniPrimary (citable) accession number: J3MTR9
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: July 18, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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