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Entry version 41 (16 Oct 2019)
Sequence version 1 (03 Oct 2012)
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Protein

Methionine S-methyltransferase

Gene
N/A
Organism
Oryza brachyantha
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes the catalytic activity of an enzyme, i.e. a chemical reaction that the enzyme catalyzes.<p><a href='/help/catalytic_activity' target='_top'>More...</a></p>Catalytic activityi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionMethyltransferasePROSITE-ProRule annotation, Transferase
LigandS-adenosyl-L-methioninePROSITE-ProRule annotation

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Recommended name:
Methionine S-methyltransferasePROSITE-ProRule annotation (EC:2.1.1.12PROSITE-ProRule annotation)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiOryza brachyanthaImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri4533 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliopsidaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000006038 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 5

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
4533.OB05G10410.1

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini1236 – 1310U-boxInterPro annotationAdd BLAST75

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily.PROSITE-ProRule annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410IF7S Eukaryota
ENOG410Y93S LUCA

Identification of Orthologs from Complete Genome Data

More...
OMAi
LGANGHY

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
1.25.40.10, 1 hit
3.30.40.10, 1 hit
3.40.640.10, 1 hit
3.90.1150.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR004839 Aminotransferase_I/II
IPR025779 Met_S-MeTrfase
IPR025714 Methyltranfer_dom
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major
IPR029063 SAM-dependent_MTases
IPR011990 TPR-like_helical_dom_sf
IPR003613 Ubox_domain
IPR013083 Znf_RING/FYVE/PHD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00155 Aminotran_1_2, 1 hit
PF13847 Methyltransf_31, 1 hit
PF04564 U-box, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00504 Ubox, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF48452 SSF48452, 1 hit
SSF53335 SSF53335, 1 hit
SSF53383 SSF53383, 2 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS51555 SAM_MT12, 1 hit
PS51698 U_BOX, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

J3M367-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAAADLELE LESFLATCAA SGDAASPAAK AVLERLHHPP SRADARRLLG
60 70 80 90 100
AVRRRFAGPA AGEECFRTFH FRIHHVLLDD PHLQGFQQRK KLTMMEIPSI
110 120 130 140 150
FIPEDWSFTF YEGLNRHPDS IFRDKTVAEL GCGNGWISIA LAEKWSPSKV
160 170 180 190 200
YGLDINPRAV KIAWINLYLN ALDDDGLPIY DGEGKTLLDR VEFYESDLLS
210 220 230 240 250
YCRDNKIELD RIVGCIPQIL NPNPEAMSKI VTENSSEEFL YSLSNYCALQ
260 270 280 290 300
GFVEDQFGLG LIARAVEEGI SVIKPMGIMI FNMGGRPGQG VCERLFRRRG
310 320 330 340 350
FCITKLWQTK IMQAADTDIS ALVEIEKNSR HRFEFFMDLV GDQPVCARTA
360 370 380 390 400
WAYMKSGGRI SHALSVYSCQ LRQPNQVKKI FEFLKDGFHE VSSSLDLSFD
410 420 430 440 450
DDSVADEKIP FLAYLASFLK ENKYNPCEPP AGCLNFRSLV AGFMKSYHHI
460 470 480 490 500
PLTPDNVVVF PSRAVAIENA LRLFSPALAI VDEHLTRHLP KQWLTSLAIE
510 520 530 540 550
GRADCNRAED TVTVIEAPRQ SDLLIELIRK LKPQVVVTGM AQFEAITSAA
560 570 580 590 600
FENLLSVTKD VGSRLFIDIS EHLELSSLPS SNGVLKYLAG KTLPFHAAIL
610 620 630 640 650
CGLVKNQVYS DLEVAFAISE DEAVYRALSQ TIELLEGHTS QISQHYYGCL
660 670 680 690 700
FHELLAFQIA DRHPQQERQP AEVIPQKMIG FSNSAMSTLK EAEFFVPDPK
710 720 730 740 750
ESGVIHMDLD RSFLPVPSEV NASIFESFVR QNITESETDV RSSIQQLVKD
760 770 780 790 800
SYGFPEDLCS EIIYGNTCLA LFNKLVLCCI QDQGTLLFPL GANGHYVLAA
810 820 830 840 850
KFVNVNTVTI PTKLDSGFKI EPRVLADTLE TVSRPWVYIS GPTINPTGLL
860 870 880 890 900
YSDNDIQELL SVCVKYGARV VIDTSFSGLE FQTDGWSRWN LERCLSAVNC
910 920 930 940 950
PNPSFSVALL GELSFELTAA GHDFGFLILN DSSLVDTFHS FPSLSRPHST
960 970 980 990 1000
LKYTFKKLLG LKNQKDERFS NLIMEQKETL KSRAGHLIKT LESCGWNVAG
1010 1020 1030 1040 1050
SRGGISMLAR PTGYIGKTIK VEGFEGKLDG CNIREAILRS TGLCINSSSW
1060 1070 1080 1090 1100
TGIPDHCRFS FALESGEFER AVGCITRFNE LVLGSKGSDM NVLAFGITDW
1110 1120 1130 1140 1150
PKVEEDSRKA LALDATLVKG HYLLGCALLE KEQCALAIKE FDRALDLLRS
1160 1170 1180 1190 1200
SNLKDKMVED IWQVLAKAKY IDWEIHSTER VWKMQSLKEA CENALQEHHF
1210 1220 1230 1240 1250
LSGTLVGDGA TSEYSDQLKL LSEVFTKATI DDTPTDVPDY LCCQITFEIF
1260 1270 1280 1290 1300
RDPVITPSGI TYEKSILLEH LRKVGNFDPV TREPLKEHQL VPNLAIKAAV
1310
QAYLKDHSWA YKLN
Length:1,314
Mass (Da):146,763
Last modified:October 3, 2012 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i41222E8E864C6DE9
GO

Genome annotation databases

Ensembl plant genome annotation project

More...
EnsemblPlantsi
OB05G10410.1; OB05G10410.1; OB05G10410

Gramene; a comparative resource for plants

More...
Gramenei
OB05G10410.1; OB05G10410.1; OB05G10410

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi4533.OB05G10410.1

Genome annotation databases

EnsemblPlantsiOB05G10410.1; OB05G10410.1; OB05G10410
GrameneiOB05G10410.1; OB05G10410.1; OB05G10410

Phylogenomic databases

eggNOGiENOG410IF7S Eukaryota
ENOG410Y93S LUCA
OMAiLGANGHY

Family and domain databases

Gene3Di1.25.40.10, 1 hit
3.30.40.10, 1 hit
3.40.640.10, 1 hit
3.90.1150.10, 1 hit
InterProiView protein in InterPro
IPR004839 Aminotransferase_I/II
IPR025779 Met_S-MeTrfase
IPR025714 Methyltranfer_dom
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major
IPR029063 SAM-dependent_MTases
IPR011990 TPR-like_helical_dom_sf
IPR003613 Ubox_domain
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00155 Aminotran_1_2, 1 hit
PF13847 Methyltransf_31, 1 hit
PF04564 U-box, 1 hit
SMARTiView protein in SMART
SM00504 Ubox, 1 hit
SUPFAMiSSF48452 SSF48452, 1 hit
SSF53335 SSF53335, 1 hit
SSF53383 SSF53383, 2 hits
PROSITEiView protein in PROSITE
PS51555 SAM_MT12, 1 hit
PS51698 U_BOX, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiJ3M367_ORYBR
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: J3M367
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: October 16, 2019
This is version 41 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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